Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   FDQ49_RS11575 Genome accession   NZ_CP040105
Coordinates   2455520..2457565 (-) Length   681 a.a.
NCBI ID   WP_022575959.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis M2     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2450520..2462565
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FDQ49_RS11540 (FDQ49_11540) - 2450996..2451679 (+) 684 WP_002049738.1 outer membrane lipid asymmetry maintenance protein MlaD -
  FDQ49_RS11545 (FDQ49_11545) - 2451706..2452347 (+) 642 WP_002049753.1 MlaC/ttg2D family ABC transporter substrate-binding protein -
  FDQ49_RS11550 (FDQ49_11550) - 2452359..2452646 (+) 288 WP_000250997.1 STAS domain-containing protein -
  FDQ49_RS11555 (FDQ49_11555) - 2452721..2453734 (-) 1014 WP_002049699.1 CorA family divalent cation transporter -
  FDQ49_RS11560 (FDQ49_11560) - 2453892..2454473 (+) 582 WP_002049746.1 TIGR00730 family Rossman fold protein -
  FDQ49_RS11565 (FDQ49_11565) - 2454488..2454889 (+) 402 WP_022575961.1 NUDIX hydrolase -
  FDQ49_RS11570 (FDQ49_11570) comF 2454892..2455527 (-) 636 WP_022575960.1 ComF family protein Machinery gene
  FDQ49_RS11575 (FDQ49_11575) recG 2455520..2457565 (-) 2046 WP_022575959.1 ATP-dependent DNA helicase RecG Machinery gene
  FDQ49_RS11580 (FDQ49_11580) - 2457586..2458401 (+) 816 WP_006580703.1 NAD(P)H-binding protein -
  FDQ49_RS11585 (FDQ49_11585) - 2458481..2459467 (+) 987 WP_031225385.1 putative solute-binding protein -
  FDQ49_RS11590 (FDQ49_11590) plsB 2459510..2462083 (-) 2574 WP_022575957.1 glycerol-3-phosphate 1-O-acyltransferase PlsB -

Sequence

Protein


Download         Length: 681 a.a.        Molecular weight: 76490.08 Da        Isoelectric Point: 7.7108

>NTDB_id=319985 FDQ49_RS11575 WP_022575959.1 2455520..2457565(-) (recG) [Acinetobacter nosocomialis M2]
MTSVHQLQGVGSASAALLEKLNIFTTDDLLFHLPRDYEDRSTIIPMNQLVVGRSYLLEGEVKSVDFPPGKRKSMAALIQD
EFGKVTLRFYHIYKNLTDKIKPGNRLRIFGEVRVGARGLELYHPEIQLINEHTPLPKTQLTAIYPSTDGLTQPKLREYVK
QALKHHSDALPELLPKQYTNGYALKEALHYIHEPPVDANMIQLAQGSHPAQQRLIFEELVAHQISLLTRRAYIRQIASPA
FPSSKVLAKKLLEALPFQMTNAQKRVSKEILTDLKQHQPMLRLVQGDVGAGKTLVAAIAACHALEADWQVALMAPTEILA
EQHYLNFKRWFEPLGITVAWLSGKQKGKARTQAEQQIKEGHAELIVGTHALFQDNVEFAKLGLVIIDEQHRFGVDQRLAL
RNKGAEQLTPHQLVMTATPIPRTLAMSAYGDLDTSIIDELPPGRTPIQTVTIPLDRREEVLNRIATNCREGKQAYWVCTL
VEQSETLDAQAAEATYQEMKERFPELNIGLVHGKMKADEKQSVMQAFKNNELQLLIATTVIEVGVDVPNASIMVIENAER
LGLSQLHQLRGRVGRGAKASFCVLLYKPPLSQNGQERLSILRESNDGFVIAEKDLELRGPGELLGTKQTGDMGFRVARLE
RDDHLLSQAHYVAQQVLKDYPEQADALLKRWLPEAPRYAYV

Nucleotide


Download         Length: 2046 bp        

>NTDB_id=319985 FDQ49_RS11575 WP_022575959.1 2455520..2457565(-) (recG) [Acinetobacter nosocomialis M2]
ATGACTTCAGTCCATCAGTTACAAGGCGTTGGATCGGCTTCAGCAGCCCTACTCGAAAAACTAAATATTTTTACCACAGA
TGATTTACTGTTTCATCTGCCCCGTGATTATGAAGATCGCAGTACCATTATTCCTATGAATCAATTGGTGGTTGGTCGTA
GTTATTTACTCGAGGGTGAAGTCAAATCTGTTGATTTCCCTCCAGGTAAACGTAAATCTATGGCCGCATTAATACAAGAT
GAATTTGGTAAGGTGACTTTACGCTTTTATCATATTTATAAAAATTTAACCGACAAAATAAAACCTGGTAACCGTTTACG
TATTTTTGGTGAAGTTCGCGTAGGTGCACGAGGACTTGAGCTTTATCATCCAGAAATTCAGCTCATTAATGAGCATACGC
CTCTACCCAAAACGCAGCTCACGGCAATTTACCCAAGTACTGATGGTTTAACGCAACCTAAGTTACGTGAATATGTTAAA
CAGGCGTTGAAGCATCATAGTGATGCTCTACCCGAGCTACTTCCTAAACAATATACAAATGGATACGCACTCAAAGAAGC
CCTACATTACATTCATGAGCCACCTGTCGATGCCAATATGATTCAATTGGCCCAAGGGTCTCATCCTGCTCAGCAACGCC
TTATTTTTGAAGAGTTGGTCGCACATCAAATTAGCCTTCTTACGCGACGTGCTTATATTCGTCAAATTGCCTCACCTGCT
TTCCCAAGCAGCAAAGTACTTGCGAAAAAACTGTTAGAAGCTCTTCCCTTTCAAATGACCAACGCACAAAAGCGTGTATC
AAAAGAAATTTTAACCGACTTAAAACAGCACCAACCGATGTTACGCTTGGTACAAGGTGATGTAGGTGCAGGTAAAACTT
TAGTCGCGGCAATTGCTGCATGTCACGCTTTAGAAGCAGATTGGCAAGTTGCCTTAATGGCACCTACCGAAATTTTAGCA
GAGCAGCATTATTTAAATTTTAAGCGCTGGTTTGAACCTTTAGGTATTACAGTAGCTTGGCTGTCAGGCAAACAAAAAGG
TAAAGCACGAACACAAGCTGAACAACAAATCAAAGAGGGCCATGCCGAGCTTATTGTAGGTACGCATGCTTTGTTTCAAG
ATAATGTTGAGTTTGCCAAATTAGGACTCGTGATTATTGATGAGCAGCACCGCTTTGGGGTGGATCAACGATTAGCTTTA
CGCAACAAAGGCGCAGAACAACTCACACCACATCAACTCGTCATGACTGCAACGCCAATTCCTAGAACATTAGCAATGAG
TGCTTATGGCGATTTGGATACATCGATTATTGATGAATTGCCGCCAGGCCGAACTCCAATTCAGACCGTCACAATTCCGC
TAGATCGTCGTGAAGAAGTGCTAAATCGAATTGCTACAAATTGCCGAGAAGGTAAACAAGCCTACTGGGTATGTACTCTG
GTTGAACAATCCGAAACTTTAGATGCTCAAGCTGCGGAAGCCACTTATCAAGAAATGAAAGAGCGCTTTCCTGAACTTAA
TATTGGTTTGGTTCATGGCAAAATGAAAGCTGATGAAAAGCAATCTGTCATGCAAGCATTTAAAAACAATGAACTACAAC
TGCTAATTGCAACAACTGTTATTGAGGTTGGGGTAGATGTACCTAATGCCTCAATTATGGTCATTGAAAATGCTGAACGC
TTAGGTCTTTCACAACTACACCAATTACGAGGTCGAGTCGGACGAGGTGCAAAGGCTAGTTTTTGTGTTCTTCTCTATAA
ACCCCCACTTTCACAAAATGGGCAAGAAAGACTTTCAATTTTAAGAGAAAGTAACGACGGCTTTGTCATTGCTGAAAAAG
ACCTTGAATTACGAGGTCCGGGTGAATTATTAGGAACAAAACAGACAGGTGATATGGGCTTCCGTGTCGCACGTTTAGAA
CGAGATGATCATTTACTGAGTCAAGCGCATTACGTTGCACAACAAGTTCTAAAAGATTACCCTGAGCAAGCTGACGCCCT
CTTGAAACGGTGGCTGCCTGAAGCACCTCGATACGCTTATGTTTAA

Domains

Predicted by InterProScan.

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(605-663)

DEAD/DEAH box helicase (DEAD)

(262-422)

RecG wedge domain (RecG_wedge)

(7-163)

Helicase conserved C-terminal domain (Helicase_C)

(466-576)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

50.075

98.238

0.492
  recG/mmsA Streptococcus pneumoniae R6

41.504

97.651

0.405
  recG/mmsA Streptococcus pneumoniae R36A

41.504

97.651

0.405
  recG Bacillus subtilis subsp. subtilis str. 168

38.719

100

0.391