Detailed information NTG0319749

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: D9C18_RS18985
• Genome accession: NZ_CP032865
• Coordinates: 3565283..3565900 (+)
• Length: 205 a.a.
• NCBI ID: WP_014480312.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain N3-1
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3560283..3570900

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9C18_RS18950 (D9C18_18950)	aroE	3560941..3561783 (+)	843	WP_014480317.1	shikimate dehydrogenase	-
D9C18_RS18955 (D9C18_18955)	yhbY	3561777..3562067 (+)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-
D9C18_RS18960 (D9C18_18960)	nadD	3562079..3562648 (+)	570	WP_004398676.1	nicotinate-nucleotide adenylyltransferase	-
D9C18_RS18965 (D9C18_18965)	yqeK	3562638..3563198 (+)	561	WP_014480316.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
D9C18_RS18970 (D9C18_18970)	rsfS	3563216..3563572 (+)	357	WP_014480315.1	ribosome silencing factor	-
D9C18_RS18975 (D9C18_18975)	yqeM	3563569..3564312 (+)	744	WP_014480314.1	class I SAM-dependent methyltransferase	-
D9C18_RS18980 (D9C18_18980)	comER	3564378..3565199 (-)	822	WP_014480313.1	late competence protein ComER	-
D9C18_RS18985 (D9C18_18985)	comEA	3565283..3565900 (+)	618	WP_014480312.1	competence protein ComEA	Machinery gene
D9C18_RS18990 (D9C18_18990)	comEB	3565967..3566536 (+)	570	WP_003229978.1	ComE operon protein 2	-
D9C18_RS18995 (D9C18_18995)	comEC	3566540..3568870 (+)	2331	WP_033881047.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
D9C18_RS19000 (D9C18_19000)	yqzM	3568910..3569044 (-)	135	WP_003229983.1	YqzM family protein	-
D9C18_RS19005 (D9C18_19005)	-	3569085..3569234 (+)	150	WP_003229985.1	hypothetical protein	-
D9C18_RS19010 (D9C18_19010)	holA	3569274..3570317 (+)	1044	WP_014480310.1	DNA polymerase III subunit delta	-
D9C18_RS19015 (D9C18_19015)	rpsT	3570332..3570598 (-)	267	WP_003229989.1	30S ribosomal protein S20	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 21781.51 Da
• Isoelectric Point: 4.7220

>NTDB_id=319749 D9C18_RS18985 WP_014480312.1 3565283..3565900(+) (comEA) [Bacillus subtilis subsp. subtilis strain N3-1]
MNWLNQHKKAIILAASAAVFTAIMIFLATGKNKEPVKQAVPTETENTVVKQEANNDESNETIVIDIKGAVQHPGVYEMRT
GDRVSQAIEKAGGTSEQADEAQVNLAEILQDGTVVYIPKKGEEIAVQQGGGGSVQSDGGKGALVNINTATLEELQGISGV
GPSKAEAIIAYREENGRFQTIEDITKVSGIGEKSFEKIKSSITVK

Nucleotide

• Length: 618 bp

>NTDB_id=319749 D9C18_RS18985 WP_014480312.1 3565283..3565900(+) (comEA) [Bacillus subtilis subsp. subtilis strain N3-1]
ATGAATTGGTTGAATCAGCATAAGAAAGCAATTATTTTAGCGGCTTCTGCGGCTGTTTTCACAGCGATTATGATCTTTCT
GGCCACAGGGAAAAATAAAGAGCCGGTGAAGCAAGCTGTACCAACAGAGACAGAAAATACAGTGGTAAAGCAGGAAGCAA
ACAACGACGAGTCAAACGAAACAATTGTGATAGACATCAAAGGTGCTGTTCAGCATCCTGGCGTTTATGAAATGCGAACA
GGGGACAGAGTATCTCAGGCAATTGAGAAAGCGGGCGGGACCAGTGAACAAGCAGACGAAGCGCAAGTAAATTTGGCGGA
GATTCTGCAGGACGGGACAGTGGTGTACATCCCGAAAAAGGGAGAGGAAATAGCAGTGCAGCAAGGTGGCGGAGGGTCAG
TCCAAAGCGATGGAGGGAAGGGAGCGCTGGTGAATATCAATACAGCAACCTTAGAGGAGTTACAAGGCATCTCAGGGGTG
GGGCCATCCAAAGCTGAAGCTATTATTGCATACCGGGAAGAAAACGGGCGTTTCCAAACAATTGAAGATATCACTAAGGT
TTCAGGAATAGGTGAAAAGTCATTTGAGAAAATAAAGTCTTCCATTACAGTAAAGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (142-203)

• SLBB domain (SLBB) (63-118)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	99.512	100	0.995
comEA	Staphylococcus aureus MW2	37.273	100	0.4
comEA	Staphylococcus aureus N315	36.364	100	0.39