Detailed information NTG0319670

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: D9C17_RS18625
• Genome accession: NZ_CP032863
• Coordinates: 3472588..3473541 (+)
• Length: 317 a.a.
• NCBI ID: WP_014479436.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain N2-2
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 3467588..3478541

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9C17_RS18595 (D9C17_18595)	argF	3468130..3469089 (+)	960	WP_014479432.1	ornithine carbamoyltransferase	-
D9C17_RS18605 (D9C17_18605)	yjzC	3470465..3470644 (+)	180	WP_003245356.1	YjzC family protein	-
D9C17_RS18610 (D9C17_18610)	yjzD	3470690..3470875 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
D9C17_RS18615 (D9C17_18615)	-	3471124..3471858 (+)	735	WP_014479433.1	hypothetical protein	-
D9C17_RS18620 (D9C17_18620)	-	3471940..3472497 (+)	558	WP_014479435.1	hypothetical protein	-
D9C17_RS18625 (D9C17_18625)	med	3472588..3473541 (+)	954	WP_014479436.1	transcriptional regulator Med	Regulator
D9C17_RS18630 (D9C17_18630)	comZ	3473556..3473747 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
D9C17_RS18635 (D9C17_18635)	yjzB	3473777..3474004 (-)	228	WP_031600361.1	spore coat protein YjzB	-
D9C17_RS18640 (D9C17_18640)	fabH	3474169..3475107 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
D9C17_RS18645 (D9C17_18645)	fabF	3475130..3476371 (+)	1242	WP_014479438.1	beta-ketoacyl-ACP synthase II	-
D9C17_RS18650 (D9C17_18650)	yjaZ	3476447..3477232 (+)	786	WP_014479439.1	DUF2268 domain-containing protein	-
D9C17_RS18655 (D9C17_18655)	appD	3477424..3478410 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.88 Da
• Isoelectric Point: 4.6652

>NTDB_id=319670 D9C17_RS18625 WP_014479436.1 3472588..3473541(+) (med) [Bacillus subtilis subsp. subtilis strain N2-2]
MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=319670 D9C17_RS18625 WP_014479436.1 3472588..3473541(+) (med) [Bacillus subtilis subsp. subtilis strain N2-2]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGAAAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTCCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.369	100	0.994