Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   D9C14_RS03160 Genome accession   NZ_CP032860
Coordinates   580994..583306 (-) Length   770 a.a.
NCBI ID   WP_047183111.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain SSJ-1     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 575994..588306
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C14_RS03120 (D9C14_03120) mrpB 576461..576892 (+) 432 WP_038429537.1 Na(+)/H(+) antiporter subunit B -
  D9C14_RS03125 (D9C14_03125) mrpC 576892..577233 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  D9C14_RS03130 (D9C14_03130) mrpD 577226..578707 (+) 1482 WP_029725869.1 Na+/H+ antiporter subunit D -
  D9C14_RS03135 (D9C14_03135) mrpE 578713..579189 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  D9C14_RS03140 (D9C14_03140) mrpF 579189..579473 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  D9C14_RS03145 (D9C14_03145) mnhG 579457..579831 (+) 375 WP_015714623.1 monovalent cation/H(+) antiporter subunit G -
  D9C14_RS03150 (D9C14_03150) yuxO 579870..580250 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  D9C14_RS03155 (D9C14_03155) comA 580269..580913 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  D9C14_RS03160 (D9C14_03160) comP 580994..583306 (-) 2313 WP_047183111.1 histidine kinase Regulator
  D9C14_RS03165 (D9C14_03165) comX 583322..583543 (-) 222 WP_014114983.1 competence pheromone ComX -
  D9C14_RS03170 (D9C14_03170) - 583540..584409 (-) 870 WP_015714626.1 polyprenyl synthetase family protein -
  D9C14_RS03175 (D9C14_03175) degQ 584594..584734 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  D9C14_RS03180 (D9C14_03180) - 584956..585081 (+) 126 WP_121549029.1 hypothetical protein -
  D9C14_RS03185 (D9C14_03185) - 585196..585564 (+) 369 WP_038427878.1 hypothetical protein -
  D9C14_RS03190 (D9C14_03190) pdeH 585540..586769 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89377.38 Da        Isoelectric Point: 8.1715

>NTDB_id=319461 D9C14_RS03160 WP_047183111.1 580994..583306(-) (comP) [Bacillus subtilis subsp. subtilis strain SSJ-1]
MHRNNNFYKYLSLAFIILSFVYVIYLSYISVFNIFVGADVKINEQGKLEVTKVVDYTDEYYSGVKKGDIILEVNGQKGSE
IQLESGRLVNVESLTVERDNKSFHLQNVSLISEENLFMYLIPLISYSICLFCIFFVYRINKVRKSPSAFVLILFLLFVSV
AYVSACGARRGEEVSTYLLVLTLVSCPILYIHFIYKYFAELGTKLFKKKILIIMYILPLVNLLLEAVLSNRLNSSAFLSN
LNLISFFVLVLTVSILIHQGIRKIKQNEQKSILKILAYINILSFSPFIIFFVIPYVLFDKYLSPFSLAAFTLVIPFSLVY
QFMTNRLYNIDFVVGRLKYYGFLAITPTVIVVTIFNYIQKPEDNFYSVKLTVVIYLLMFAVFYFKEIIDFRFKLKRFTEK
FNYQDGIFKFTQLIKQASSVDQVLNHFKNTILEVLNIDNACVYDNSKGEITLLSKNNFKDLTYKNHEQYVKNFSGDIGKI
KEFKQGFIIKIGERGDRSFLVLCFSSYNTFKLTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLEDLKQQESNPVWLKKL
MYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLY
DLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDD
GVGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=319461 D9C14_RS03160 WP_047183111.1 580994..583306(-) (comP) [Bacillus subtilis subsp. subtilis strain SSJ-1]
ATGCACAGAAATAATAACTTCTATAAATATTTGTCTCTAGCTTTTATCATTTTAAGTTTTGTTTATGTGATCTACCTCTC
TTATATTTCTGTTTTTAATATCTTTGTAGGTGCGGATGTGAAGATTAATGAACAGGGTAAGTTAGAGGTTACCAAAGTTG
TGGATTATACAGATGAATATTATTCGGGTGTAAAAAAGGGTGACATCATTCTCGAAGTTAATGGGCAAAAAGGAAGTGAA
ATCCAGTTAGAAAGCGGAAGATTGGTCAATGTAGAAAGCTTAACTGTTGAAAGAGATAATAAATCATTTCATTTACAAAA
TGTAAGCCTAATAAGTGAAGAAAATTTATTTATGTATCTCATTCCGCTCATATCTTATTCAATCTGTTTATTTTGTATAT
TTTTTGTTTACAGAATAAATAAAGTAAGAAAATCACCTTCTGCTTTTGTTTTAATCTTATTTTTGTTATTTGTATCAGTA
GCATATGTAAGTGCCTGCGGGGCAAGAAGAGGTGAAGAGGTTAGCACTTATCTACTTGTCCTTACTTTAGTAAGTTGTCC
AATTTTATATATACATTTCATATATAAATACTTTGCGGAATTGGGTACAAAGTTATTCAAAAAGAAGATTTTAATCATTA
TGTATATACTTCCACTCGTAAACCTGTTACTAGAAGCTGTTTTGAGTAATAGATTAAATTCTTCGGCTTTTTTGTCAAAC
TTGAACTTGATTTCCTTTTTTGTCCTAGTCCTTACTGTATCTATTCTTATCCATCAAGGGATTAGAAAAATCAAACAAAA
TGAGCAAAAGTCAATTTTAAAAATCCTTGCTTATATAAATATCCTGTCTTTTAGTCCTTTTATTATCTTTTTTGTTATTC
CCTATGTGTTGTTTGATAAGTATCTTTCACCCTTTAGTTTGGCAGCTTTTACACTTGTTATACCTTTTTCTTTAGTGTAT
CAATTTATGACAAATAGACTTTATAATATTGACTTTGTTGTAGGACGGCTTAAATACTATGGATTTTTAGCCATTACACC
TACTGTTATTGTGGTCACCATATTTAATTACATTCAAAAACCAGAAGATAACTTTTACTCCGTTAAACTAACAGTTGTAA
TATATTTGCTTATGTTTGCTGTCTTTTACTTTAAAGAAATCATTGATTTTCGTTTCAAGTTGAAAAGATTTACAGAGAAA
TTTAATTATCAAGATGGGATTTTTAAATTTACTCAGTTGATTAAGCAAGCATCATCAGTAGATCAAGTACTTAATCACTT
TAAAAATACAATCCTAGAAGTATTAAACATAGATAATGCTTGCGTGTATGATAATTCTAAAGGGGAAATCACCCTTCTTA
GTAAGAACAACTTTAAAGATTTGACTTATAAAAATCATGAGCAATATGTGAAAAATTTTTCTGGTGATATCGGTAAAATT
AAAGAGTTTAAACAAGGTTTTATTATTAAAATAGGTGAACGAGGAGACAGATCATTTTTAGTACTCTGTTTCTCAAGTTA
TAATACTTTTAAATTAACAAGGGATGAAATTGCATGGCTTCAAACATTAGCGTTTTATACAAATGTCTCATTGGAAAACG
TTATGAAAATCGAAGAATTGATGGTGCATCTTGAGGATTTAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTC
ATGTACACGATCGAAGAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTT
AAAACGCCAGTGTGAGCTGTTTTTGGGTGATTTTAAGAAGGATGACAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTG
TACAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTAT
GATCTTGGGCTGGTCAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATAC
CGGGAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGG
TCAAGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGAT
GGCGTAGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGC
TTTAGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

56.177

99.87

0.561


Multiple sequence alignment