Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   D9C11_RS05790 Genome accession   NZ_CP032855
Coordinates   1039061..1041373 (-) Length   770 a.a.
NCBI ID   WP_121591110.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain PJ-7     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 1034061..1046373
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C11_RS05750 (D9C11_05750) mrpB 1034528..1034959 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  D9C11_RS05755 (D9C11_05755) mrpC 1034959..1035300 (+) 342 WP_014480700.1 Na(+)/H(+) antiporter subunit C -
  D9C11_RS05760 (D9C11_05760) mrpD 1035293..1036774 (+) 1482 WP_033881486.1 Na+/H+ antiporter subunit D -
  D9C11_RS05765 (D9C11_05765) mrpE 1036780..1037256 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  D9C11_RS05770 (D9C11_05770) mrpF 1037256..1037540 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  D9C11_RS05775 (D9C11_05775) mnhG 1037524..1037898 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  D9C11_RS05780 (D9C11_05780) yuxO 1037937..1038317 (-) 381 WP_069837723.1 hotdog fold thioesterase -
  D9C11_RS05785 (D9C11_05785) comA 1038336..1038980 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  D9C11_RS05790 (D9C11_05790) comP 1039061..1041373 (-) 2313 WP_121591110.1 two-component system sensor histidine kinase ComP Regulator
  D9C11_RS05795 (D9C11_05795) comX 1041392..1041559 (-) 168 WP_041057586.1 competence pheromone ComX Regulator
  D9C11_RS05800 (D9C11_05800) comQ 1041547..1042446 (-) 900 WP_038828674.1 class 1 isoprenoid biosynthesis enzyme Regulator
  D9C11_RS05805 (D9C11_05805) degQ 1042631..1042771 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  D9C11_RS05810 (D9C11_05810) - 1042993..1043118 (+) 126 WP_003228793.1 hypothetical protein -
  D9C11_RS05815 (D9C11_05815) - 1043232..1043600 (+) 369 WP_014477834.1 hypothetical protein -
  D9C11_RS05820 (D9C11_05820) pdeH 1043576..1044805 (-) 1230 WP_014480707.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89356.81 Da        Isoelectric Point: 8.0518

>NTDB_id=319319 D9C11_RS05790 WP_121591110.1 1039061..1041373(-) (comP) [Bacillus subtilis subsp. subtilis strain PJ-7]
MKNLMKKFTIAVIVLSILYISYTTYISMNGIIIGTKVQKNDKSQFVIEEISKSSYGQFVGLRQGDIILKINEEKPSDKHL
KWGYLSHINSSLDILRSGKKIHLKDFDLVTLNRSYSFFLFVLPLVFYFLSIICIFYIFKVNKKRRSFAAYILILLLLDIS
IAYISAGGPFRGHIINRYINLFTFISSPILYLQFIQTYLGEIGKTFLNRISFLYIIPIFNLGIEFFQDYLQVDIDFLATV
NLVSFAILTLFSFSAIYFHLNKYKYAEHSFILKLLILTNTLSFAPFLIFFVLPIIFTGNYIFPALASASLLVLIPFGLVY
QFVANKMFDIEFILGRMRYYALLAMIPTLLIVGALVLFDVMEIQMNPLRQTVFFFVVMFAVFYLKEVIDFKFRLKRFSEK
FNYQDSIFKYTQLMRGVTSLQQVFKELKNTILDVLLVSKAYTFEVTPDHKVIFLDKHEIGPDWHFYQEEFENVTSEIGKI
IEVNQGFLMKVGERGGSSYVLLCLSNINTPRLTRDEISWLKTLSFYTSVSMENVMHIEELMEHLKDLKQEGTNPIWLKKL
MFAIEEKQRSGLARDLHDSVLQDLISLKRQCELFLGDFKKDENPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLY
DLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDD
GVGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=319319 D9C11_RS05790 WP_121591110.1 1039061..1041373(-) (comP) [Bacillus subtilis subsp. subtilis strain PJ-7]
TTGAAGAACTTGATGAAAAAATTCACAATAGCTGTAATTGTTTTGAGTATCCTCTATATAAGCTATACAACTTATATTAG
TATGAATGGGATTATTATTGGGACTAAGGTTCAAAAAAATGATAAAAGTCAATTTGTAATAGAAGAAATATCAAAATCTT
CATATGGACAATTTGTTGGTCTGAGACAGGGAGATATCATATTAAAAATCAATGAAGAAAAACCTTCAGACAAACATTTG
AAATGGGGATATTTGAGTCATATTAACAGTTCTTTGGATATTTTAAGAAGTGGAAAAAAGATTCATCTCAAAGATTTTGA
TTTAGTTACTCTAAATAGATCTTATAGTTTTTTTCTGTTCGTACTTCCTTTGGTTTTTTACTTTTTAAGCATAATATGCA
TTTTTTATATATTTAAGGTAAATAAAAAAAGGAGATCATTTGCTGCCTATATTCTTATTCTATTGTTATTAGACATTTCG
ATAGCATATATAAGTGCAGGTGGACCATTTAGAGGACATATAATCAATCGGTATATTAACTTGTTTACTTTTATATCTTC
TCCTATTCTTTATCTTCAATTTATACAAACATACCTTGGAGAAATAGGAAAAACTTTTTTGAATAGAATCTCCTTTCTTT
ATATCATACCAATATTTAATCTTGGAATTGAGTTTTTTCAAGACTATTTACAAGTAGATATTGATTTTTTAGCGACTGTT
AACTTGGTTTCTTTTGCAATTTTGACTCTATTTTCTTTTTCAGCGATATATTTTCATCTTAATAAATATAAATATGCTGA
GCATTCGTTTATTCTTAAATTACTAATTTTAACAAACACTTTATCATTTGCGCCTTTTTTGATATTTTTTGTTCTTCCAA
TAATATTTACAGGTAATTATATTTTCCCGGCATTAGCTTCGGCGTCATTACTAGTACTAATTCCGTTCGGGTTAGTATAC
CAATTTGTAGCCAATAAGATGTTTGATATAGAGTTTATCTTAGGAAGAATGAGATACTATGCTCTACTTGCCATGATACC
AACTCTTCTTATAGTTGGTGCATTAGTTCTGTTTGATGTAATGGAAATACAGATGAATCCTTTACGCCAAACGGTATTTT
TTTTCGTTGTCATGTTCGCTGTCTTTTATCTTAAAGAGGTCATAGATTTTAAATTTCGGTTAAAACGTTTCTCTGAAAAA
TTCAACTATCAGGACAGTATCTTTAAATATACTCAGCTAATGAGGGGGGTAACTTCTCTCCAACAAGTCTTTAAAGAACT
GAAAAATACTATTTTGGATGTTTTACTTGTAAGCAAAGCTTATACCTTTGAGGTTACTCCTGATCACAAAGTGATATTTT
TAGATAAGCATGAAATTGGACCGGACTGGCATTTTTATCAAGAGGAATTTGAAAACGTAACTTCAGAAATCGGGAAAATT
ATTGAAGTCAATCAGGGTTTTCTTATGAAAGTTGGTGAACGAGGCGGAAGTTCTTATGTTCTGCTTTGTTTATCTAATAT
TAACACTCCTCGGCTAACACGGGATGAGATATCATGGTTGAAAACACTGTCTTTCTATACAAGTGTGTCCATGGAAAATG
TCATGCATATTGAGGAGCTCATGGAACATTTGAAGGACTTAAAACAAGAGGGAACCAACCCCATCTGGCTGAAAAAGCTA
ATGTTTGCAATCGAAGAAAAACAGCGTTCAGGACTCGCCCGCGATCTCCACGATTCCGTTCTTCAGGATTTGATTTCATT
AAAACGCCAGTGTGAGCTGTTTCTGGGTGATTTCAAGAAGGATGAAAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTG
TGCAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTAT
GATCTTGGATTGGTGAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATAC
CGGGAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGG
TCAAGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGAT
GGCGTAGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGC
TTTAGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

97.143

100

0.971


Multiple sequence alignment