Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | D9C11_RS02005 | Genome accession | NZ_CP032855 |
| Coordinates | 341387..341722 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis subsp. subtilis strain PJ-7 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 336387..346722
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9C11_RS01985 (D9C11_01985) | gcvT | 336979..338067 (-) | 1089 | WP_038829737.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| D9C11_RS01990 (D9C11_01990) | hepAA | 338509..340182 (+) | 1674 | WP_041334956.1 | SNF2-related protein | - |
| D9C11_RS01995 (D9C11_01995) | yqhG | 340203..340997 (+) | 795 | WP_043857814.1 | YqhG family protein | - |
| D9C11_RS02000 (D9C11_02000) | sinI | 341180..341353 (+) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| D9C11_RS02005 (D9C11_02005) | sinR | 341387..341722 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| D9C11_RS02010 (D9C11_02010) | tasA | 341815..342600 (-) | 786 | WP_017696201.1 | biofilm matrix protein TasA | - |
| D9C11_RS02015 (D9C11_02015) | sipW | 342665..343237 (-) | 573 | WP_072557060.1 | signal peptidase I SipW | - |
| D9C11_RS02020 (D9C11_02020) | - | 343221..343493 (-) | 273 | Protein_402 | amyloid fiber anchoring/assembly protein TapA | - |
| D9C11_RS02025 (D9C11_02025) | - | 343631..344755 (+) | 1125 | WP_014478926.1 | IS4-like element IS4Bsu1 family transposase | - |
| D9C11_RS02030 (D9C11_02030) | tapA | 344900..345391 (-) | 492 | Protein_404 | amyloid fiber anchoring/assembly protein TapA | - |
| D9C11_RS02035 (D9C11_02035) | yqzG | 345662..345988 (+) | 327 | WP_026113671.1 | YqzG/YhdC family protein | - |
| D9C11_RS02040 (D9C11_02040) | spoIITA | 346030..346209 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| D9C11_RS02045 (D9C11_02045) | comGG | 346280..346654 (-) | 375 | WP_032726157.1 | ComG operon protein ComGG | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=319298 D9C11_RS02005 WP_003226345.1 341387..341722(+) (sinR) [Bacillus subtilis subsp. subtilis strain PJ-7]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=319298 D9C11_RS02005 WP_003226345.1 341387..341722(+) (sinR) [Bacillus subtilis subsp. subtilis strain PJ-7]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |