Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   D7I46_RS08940 Genome accession   NZ_CP032627
Coordinates   1922175..1923458 (-) Length   427 a.a.
NCBI ID   WP_120772587.1    Uniprot ID   A0A387BBR4
Organism   Lactococcus allomyrinae strain 1JSPR-7     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1917175..1928458
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D7I46_RS08925 (D7I46_08925) - 1918039..1918686 (-) 648 WP_120772585.1 hypothetical protein -
  D7I46_RS08930 (D7I46_08930) - 1918689..1920038 (-) 1350 WP_240424388.1 FAD-dependent oxidoreductase -
  D7I46_RS08935 (D7I46_08935) - 1920067..1921917 (-) 1851 WP_120772586.1 proline--tRNA ligase -
  D7I46_RS08940 (D7I46_08940) eeP 1922175..1923458 (-) 1284 WP_120772587.1 RIP metalloprotease RseP Regulator
  D7I46_RS08945 (D7I46_08945) - 1923744..1924547 (-) 804 WP_120772588.1 phosphatidate cytidylyltransferase -
  D7I46_RS08950 (D7I46_08950) - 1924547..1925284 (-) 738 WP_120772589.1 isoprenyl transferase -
  D7I46_RS08955 (D7I46_08955) yajC 1925612..1925941 (-) 330 WP_120772590.1 preprotein translocase subunit YajC -
  D7I46_RS08960 (D7I46_08960) - 1926227..1926895 (-) 669 WP_120772591.1 DNA alkylation repair protein -
  D7I46_RS08965 (D7I46_08965) - 1926895..1927287 (-) 393 WP_120772592.1 tautomerase family protein -
  D7I46_RS08970 (D7I46_08970) - 1927674..1928423 (-) 750 WP_120772593.1 ABC transporter permease -

Sequence


Protein


Download         Length: 427 a.a.        Molecular weight: 46260.74 Da        Isoelectric Point: 6.2440

>NTDB_id=317319 D7I46_RS08940 WP_120772587.1 1922175..1923458(-) (eeP) [Lactococcus allomyrinae strain 1JSPR-7]
MIETLITFIIIFGIIVAIHEYGHLWWAKRAGILVREYAIGMGPKIFAHRAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGMPASLVMGLTESEVTDSVSVSDKITRINLSEHVELDHAIPMLVTDYDFEKELYIEGEVFGETKRYSVYHDATIIEEDG
TEVRIAPIDVQYQSVGVIHKILTNFGGPLNNFILGIIAFIVLTFMQGGVPSNTNVVGQVEHSTPAYSAGLKAGDKIQSVN
GENTDNWSEVVSAITASEGKKLNLQISRGGADKELSVTPKKIDGAYRVGIMQSIKTGFFDKVTGGFVQAGQAATAIFKAL
GSLIARPSLDKLGGPVAIYQLSGEAARAGLTAIVYLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSQEKESI
ITLVGVVFMVVLFIAVTWNDILRAFVH

Nucleotide


Download         Length: 1284 bp        

>NTDB_id=317319 D7I46_RS08940 WP_120772587.1 1922175..1923458(-) (eeP) [Lactococcus allomyrinae strain 1JSPR-7]
TTGATTGAGACTTTGATTACCTTCATCATCATTTTTGGAATTATTGTTGCGATTCATGAGTATGGTCATCTTTGGTGGGC
AAAACGTGCAGGAATTTTGGTGCGCGAATATGCAATCGGCATGGGACCAAAAATCTTTGCTCATCGCGCTAAAGATGGGA
CGTTATATACTATTCGTATTTTACCTCTGGGAGGCTATGTCCGTTTGGCCGGATGGGGTGATGACAAGACTGAGATTAAA
AAGGGTATGCCAGCATCTCTTGTCATGGGACTGACAGAATCAGAAGTTACTGACAGCGTTTCTGTCAGTGATAAAATTAC
AAGAATTAATCTGTCAGAGCACGTAGAGCTTGACCACGCTATTCCAATGCTTGTGACCGATTATGATTTTGAAAAAGAGC
TATATATTGAAGGTGAGGTTTTCGGCGAAACAAAGCGGTACAGTGTTTACCATGATGCGACAATCATTGAAGAAGATGGG
ACAGAAGTTCGTATTGCACCGATTGATGTTCAATATCAATCAGTAGGTGTTATTCATAAAATACTGACAAACTTTGGCGG
ACCGCTGAATAATTTCATTTTAGGAATTATAGCCTTTATCGTCTTAACCTTCATGCAAGGTGGAGTCCCGTCAAATACAA
ATGTAGTTGGACAAGTTGAACACAGCACACCAGCTTATAGTGCAGGATTGAAAGCTGGCGATAAGATTCAGTCTGTAAAC
GGAGAAAATACTGACAACTGGTCGGAAGTTGTATCAGCAATTACAGCTTCTGAAGGCAAAAAATTAAACCTTCAAATTAG
TAGAGGCGGTGCTGACAAGGAACTGTCAGTAACACCAAAAAAAATTGATGGTGCTTACCGTGTAGGAATCATGCAATCAA
TTAAAACGGGCTTCTTTGACAAGGTGACAGGCGGTTTTGTTCAAGCAGGACAAGCAGCAACAGCTATCTTTAAAGCACTA
GGTAGCTTGATTGCACGACCGAGTCTGGATAAATTAGGAGGACCAGTAGCAATTTACCAGTTGAGTGGTGAAGCTGCCCG
TGCTGGATTGACAGCTATTGTTTATCTTCTTGCCATGCTCTCTATTAACCTTGGAATTGTGAACCTTTTCCCAATTCCAG
TGCTTGATGGTGGAAAAATTGTACTGAACATCATTGAGGCAATTCGGGGAAAAGCCTTATCACAAGAGAAGGAATCAATC
ATTACACTTGTCGGAGTTGTTTTTATGGTTGTACTCTTTATTGCCGTTACTTGGAATGACATTCTACGTGCCTTTGTCCA
CTAA

Domains


Predicted by InterproScan.

(215-278)

(7-412)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A387BBR4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

54.651

100

0.55

  eeP Streptococcus thermophilus LMD-9

54.419

100

0.548


Multiple sequence alignment