Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   D7D53_RS07785 Genome accession   NZ_CP032621
Coordinates   1553700..1554710 (-) Length   336 a.a.
NCBI ID   WP_020900851.1    Uniprot ID   -
Organism   Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1548700..1559710
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D7D53_RS07760 (D7D53_07760) - 1548908..1550122 (-) 1215 WP_120770632.1 pyridoxal phosphate-dependent aminotransferase -
  D7D53_RS07765 (D7D53_07765) - 1550279..1550578 (-) 300 WP_120770873.1 hypothetical protein -
  D7D53_RS07770 (D7D53_07770) - 1550743..1551195 (+) 453 WP_120770633.1 universal stress protein -
  D7D53_RS07775 (D7D53_07775) - 1551230..1552618 (-) 1389 WP_120770634.1 Cof-type HAD-IIB family hydrolase -
  D7D53_RS07780 (D7D53_07780) - 1552684..1553646 (+) 963 WP_020901970.1 asparaginase -
  D7D53_RS07785 (D7D53_07785) ccpA 1553700..1554710 (-) 1011 WP_020900851.1 catabolite control protein A Regulator
  D7D53_RS07790 (D7D53_07790) - 1554949..1555266 (+) 318 WP_033681210.1 DUF960 domain-containing protein -
  D7D53_RS07795 (D7D53_07795) folB 1555311..1556123 (-) 813 WP_020901969.1 dihydroneopterin aldolase -
  D7D53_RS07800 (D7D53_07800) folE 1556166..1556720 (-) 555 WP_000380916.1 GTP cyclohydrolase I FolE -
  D7D53_RS07805 (D7D53_07805) - 1556701..1558023 (-) 1323 WP_120719132.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -
  D7D53_RS07810 (D7D53_07810) folP 1558025..1558999 (-) 975 WP_162927891.1 dihydropteroate synthase -

Sequence


Protein


Download         Length: 336 a.a.        Molecular weight: 37178.16 Da        Isoelectric Point: 5.3237

>NTDB_id=317210 D7D53_RS07785 WP_020900851.1 1553700..1554710(-) (ccpA) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITNGYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATIDAVTYLAKENERIAFVSGPLVDDINGKVRLVGYKEALKKAGISYSEGLVFESKYTYEDGYALAERLISSN
ATAAVVTGDELAAGVLNGLADHGVSVPEEFEIITSDDSQISRFTRPNLTTIAQPLYDLGAISMRMLTKIMHKEELEEREV
LLPHGLTERRSTRKRK

Nucleotide


Download         Length: 1011 bp        

>NTDB_id=317210 D7D53_RS07785 WP_020900851.1 1553700..1554710(-) (ccpA) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
ATGAATACAGACGATACAGTAACGATTTATGATGTCGCCCGTGAAGCAGGAGTTTCAATGGCGACGGTTAGCCGTGTAGT
CAATGGCAATAAGAATGTAAAAGAGAACACCCGTAAAAAAGTGCTTGAGGTGATTGATCGTTTGGATTACCGTCCAAATG
CCGTGGCGCGTGGTCTTGCAAGTAAAAAGACAACCACTGTCGGTGTCGTGATCCCAAATATTACCAATGGCTATTTCTCA
ACGCTTGCTAAAGGGATTGATGATATCGCTGAAATGTACAAGTACAATATCGTCCTTGCCAATAGTGATGAGGATGATGA
CAAGGAAGTTTCAGTTGTCAATACACTATTTTCTAAGCAAGTGGATGGTATCATCTTTATGGGGTACCACTTGACTGAAA
AAATTCGTTCAGAGTTTTCTCGCTCTCGGACACCAGTTGTTCTTGCAGGGACAGTGGACGTAGAACATCAGCTTCCAAGT
GTCAACATTGACTACAAACAAGCTACGATTGATGCAGTGACCTACCTTGCTAAAGAAAATGAGCGCATTGCTTTTGTCAG
CGGTCCACTAGTGGATGATATCAATGGTAAGGTTCGTTTGGTTGGCTACAAGGAAGCCTTGAAAAAAGCAGGTATTTCTT
ATAGCGAAGGACTGGTATTTGAATCTAAATACACTTATGAGGATGGCTATGCCTTGGCAGAACGCTTGATTTCATCAAAT
GCAACTGCAGCAGTTGTGACAGGTGATGAATTGGCAGCAGGTGTCTTGAATGGTTTGGCTGATCACGGTGTATCTGTGCC
AGAAGAGTTTGAAATCATTACTAGTGATGATTCACAAATCTCACGCTTTACCCGTCCAAACTTGACAACTATTGCTCAAC
CTCTTTATGACCTTGGTGCTATTAGCATGCGTATGTTGACTAAGATTATGCACAAGGAAGAATTGGAAGAACGTGAAGTT
CTCTTACCTCATGGTTTGACAGAGCGTCGCTCAACACGAAAACGTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

95.238

100

0.952

  ccpA Streptococcus gordonii str. Challis substr. CH1

89.521

99.405

0.89

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.704

98.512

0.568


Multiple sequence alignment