Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA   Type   Regulator
Locus tag   D7D53_RS00660 Genome accession   NZ_CP032621
Coordinates   139711..141690 (+) Length   659 a.a.
NCBI ID   WP_120769805.1    Uniprot ID   A0A387AVS2
Organism   Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 134711..146690
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D7D53_RS00650 (D7D53_00650) - 135524..136570 (+) 1047 WP_120769803.1 acyltransferase family protein -
  D7D53_RS00655 (D7D53_00655) - 136723..139488 (+) 2766 WP_120769804.1 SEC10/PgrA surface exclusion domain-containing protein -
  D7D53_RS00660 (D7D53_00660) amiA 139711..141690 (+) 1980 WP_120769805.1 peptide ABC transporter substrate-binding protein Regulator

Sequence

Protein


Download         Length: 659 a.a.        Molecular weight: 73066.64 Da        Isoelectric Point: 4.7966

>NTDB_id=317170 D7D53_RS00660 WP_120769805.1 139711..141690(+) (amiA) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
MKTRKVLALAGVTLLAAGILAACSGGSGAKGEQTFAFTYETDPDNLNYLTTGKAATADITSNVIDGLLENDKYGNLIPSM
AEDWSVSKDGLTYTYKIRQDAKWYTSEGEEYAPVKAQDFVTGLKYATDKKSEALYLVQDSIKGLDAYAKGENKDFSQVGI
KALDDQTVQYTLNKPESFWNSKTTMGVLAPVNEEFLNSKGDDFAKATDPSSILYNGPYLLKSIVTKSTVEFAKNPNYWDK
DNVHIDKVKLSFWDGQDTSKPAENFKDGSLSAARLYPTSASFAELEKEMKDNIVYTQQDSTTYVVGTNIDRQSYKYTSKT
SEEQKTSTKKALLNKDFRQAIAFGFDRTAYASQLNGQNGASKILRNIFVPPTFVQADGKNFGDMVKEKLVTYGDEWKDVN
LADAQDGLYNPEKAKAEFAKAKAALQAEGVQFPIHLDMPVDQTATTKVQRVQSMKQSLEAALGTDNVILDIQQLQKDEVL
NVTLFAQTAAGEDWDLSDNVGWGPDFSDPSTYLDIIKPSVGENTRTYLGFDSGKDNEAAKKVGLNDYDKMVNEAGEETTD
VTKRYNKYAEAQAWLTDSALVIPTTSRTGRPILSKMVPFTLPFSFAGNKGTSDPLRYKYLELQDKAVTADEYQKAQDKWM
KEKEESNKKAQEELAKHVK

Nucleotide


Download         Length: 1980 bp        

>NTDB_id=317170 D7D53_RS00660 WP_120769805.1 139711..141690(+) (amiA) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
ATGAAAACAAGGAAAGTATTGGCTCTTGCGGGAGTCACTTTATTAGCAGCAGGTATCTTAGCTGCTTGTTCTGGGGGCTC
AGGTGCTAAAGGTGAGCAGACTTTTGCATTTACCTACGAGACAGACCCAGATAACCTCAACTATTTAACAACTGGTAAGG
CAGCGACTGCTGACATTACTAGTAATGTGATTGATGGATTGCTTGAAAATGATAAATACGGGAACCTTATTCCCTCAATG
GCAGAGGACTGGTCAGTTTCTAAGGATGGGTTGACTTACACTTATAAGATTCGTCAGGATGCTAAGTGGTACACATCTGA
AGGAGAAGAATATGCTCCTGTCAAGGCTCAGGACTTTGTGACAGGTCTTAAATATGCGACAGATAAGAAATCAGAAGCTC
TTTACTTGGTACAGGATTCAATCAAAGGTTTGGATGCATACGCTAAAGGGGAAAATAAAGATTTCTCTCAAGTTGGAATT
AAAGCTCTTGACGATCAAACAGTCCAATACACTTTGAACAAACCTGAAAGTTTTTGGAATTCTAAAACAACTATGGGTGT
CTTAGCGCCAGTCAATGAAGAGTTTTTGAACTCAAAAGGGGATGACTTTGCTAAAGCAACAGATCCAAGCAGCATCTTGT
ATAATGGTCCATATTTGTTGAAATCCATTGTGACAAAATCTACTGTTGAATTTGCAAAAAATCCTAACTACTGGGATAAA
GACAATGTCCATATTGACAAAGTCAAATTGTCATTCTGGGATGGTCAAGATACTAGTAAACCTGCAGAAAATTTTAAAGA
TGGTAGTCTTTCAGCAGCTCGTCTCTATCCAACAAGTGCAAGTTTTGCAGAGCTTGAGAAAGAGATGAAGGACAATATTG
TCTATACGCAACAGGACTCTACGACTTATGTAGTAGGAACAAACATTGACCGTCAGTCCTATAAATATACTTCAAAGACT
AGCGAAGAACAAAAGACTTCAACTAAAAAGGCTTTGTTAAACAAGGATTTCCGTCAGGCTATTGCCTTTGGTTTTGATCG
TACAGCATATGCTTCTCAACTCAATGGACAAAACGGTGCAAGCAAAATCTTACGTAATATTTTTGTGCCACCAACATTTG
TCCAAGCAGATGGGAAAAACTTTGGTGACATGGTCAAAGAAAAATTGGTGACTTATGGGGATGAATGGAAGGATGTGAAC
CTTGCTGATGCTCAAGATGGTCTCTATAATCCAGAGAAAGCCAAGGCAGAATTTGCCAAAGCTAAGGCAGCCCTTCAAGC
TGAGGGAGTACAATTCCCAATTCACCTAGATATGCCTGTTGACCAAACAGCAACTACAAAAGTTCAGCGTGTCCAATCTA
TGAAACAATCCTTGGAAGCGGCTTTAGGAACTGATAATGTCATTCTTGATATTCAACAATTGCAAAAAGATGAAGTGCTT
AATGTTACTTTATTTGCACAAACTGCTGCTGGCGAGGATTGGGATCTTTCTGATAATGTTGGATGGGGACCAGACTTCTC
AGATCCATCAACTTATCTTGATATCATCAAGCCTTCTGTAGGGGAAAATACGAGAACTTACCTAGGATTTGATTCAGGAA
AAGACAATGAGGCGGCTAAAAAGGTTGGTCTCAATGATTATGATAAAATGGTCAATGAAGCAGGGGAAGAAACTACAGAT
GTTACAAAACGTTATAACAAGTATGCCGAAGCTCAAGCATGGTTGACAGATAGTGCCCTAGTCATTCCAACGACATCTCG
TACAGGGCGTCCAATCTTGTCTAAGATGGTACCATTTACCTTACCTTTCTCTTTCGCAGGAAACAAGGGGACAAGCGATC
CGCTCCGATACAAATATCTTGAACTTCAAGACAAGGCAGTCACTGCAGATGAATACCAAAAAGCTCAAGATAAATGGATG
AAAGAAAAAGAAGAATCCAATAAAAAAGCGCAAGAAGAACTTGCAAAACATGTGAAGTAG

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-519)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A387AVS2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA Streptococcus salivarius strain HSISS4

58.333

100

0.584
  amiA3 Streptococcus thermophilus LMD-9

58.03

100

0.581
  amiA3 Streptococcus thermophilus LMG 18311

57.576

100

0.577

Multiple sequence alignment