Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   D7D53_RS00575 Genome accession   NZ_CP032621
Coordinates   118616..120574 (+) Length   652 a.a.
NCBI ID   WP_120769788.1    Uniprot ID   A0A387B1B1
Organism   Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 113616..125574
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D7D53_RS00555 (D7D53_00555) - 114009..115040 (+) 1032 WP_084945099.1 sensor histidine kinase -
  D7D53_RS00560 (D7D53_00560) - 115176..116660 (-) 1485 WP_120769785.1 DUF1846 domain-containing protein -
  D7D53_RS00565 (D7D53_00565) - 116813..118420 (+) 1608 WP_120769786.1 glycoside hydrolase family 13 protein -
  D7D53_RS00575 (D7D53_00575) amiA3 118616..120574 (+) 1959 WP_120769788.1 peptide ABC transporter substrate-binding protein Regulator
  D7D53_RS00580 (D7D53_00580) - 120816..122264 (+) 1449 WP_120769789.1 LCP family protein -
  D7D53_RS00585 (D7D53_00585) cps4B 122266..122997 (+) 732 WP_120769790.1 capsular polysaccharide biosynthesis protein Cps4B -
  D7D53_RS00590 (D7D53_00590) cpsC 123006..123698 (+) 693 WP_120769791.1 capsular polysaccharide biosynthesis protein CpsC -
  D7D53_RS00595 (D7D53_00595) - 123708..124391 (+) 684 WP_120769792.1 tyrosine-protein kinase -

Sequence

Protein


Download         Length: 652 a.a.        Molecular weight: 72595.73 Da        Isoelectric Point: 5.0344

>NTDB_id=317169 D7D53_RS00575 WP_120769788.1 118616..120574(+) (amiA3) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
MKTKKRVLSAGLTFAAALLLAACGQSGSDTKTYSSTFSGNPTTFNYLLDYYADNTAIITNLVDGLLENDNHGNLVPSLAE
DWSVSSDGLTYTYKLRKDAKWFTADGEEYAPVKAQDFVTGIKYAVDNKSQALDLIQNSIKGLNDYITGADSDFSKVGVKA
IDDQTVEYTLARPEPYWNSKTTNSILFPVNEEFLNSKGKDFGTLSPNSILYSGPYLLKDFTSKSSIEYVKNPHYYDHDKV
SIEHVKLAYFDGSDQELTIRNFESGAYSIAGVYPNSSNFAKTKEKYKDNIVYSLQDKTSWYFNFNVNRKAYNHTSKTTDE
QKKSTETAVLNKNFRQAVNFAFDRTAYSAQSNGEEAASKTLRNTLVPPTFVQVGDKTFGEVIASKLVNYGTEWSGINLAD
AQDAYFNKEKAQAKFAEAKKELASQGVTFPIHLDVAVDQTSKNAVTGMNSVKQTLESILGADNIVIDVQQLSTDDFNNVA
FLAPTPADRDYDLNFDGWVGDYQDPSTYLNPFNAEDGFYLKIFGLDAQEDKAKIASLGLDTYTKMLKDADSENKDVAKRY
EKYAEAQAWMIDNSLIMSAMSSGGTASVTKVTPFTRGYSLVGIKGDGNNYKYMKLQKDTVTTKQYEEAKIKWEQESKKAI
EKAQKEAENHVK

Nucleotide


Download         Length: 1959 bp        

>NTDB_id=317169 D7D53_RS00575 WP_120769788.1 118616..120574(+) (amiA3) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
ATGAAGACAAAAAAGCGTGTTCTTAGTGCAGGCCTGACTTTTGCAGCTGCTTTGCTTTTGGCTGCTTGCGGACAATCAGG
TTCAGATACAAAAACTTACTCATCAACCTTTAGTGGAAACCCAACTACATTTAACTATTTACTAGACTACTACGCTGATA
ATACAGCTATCATTACTAACTTAGTTGATGGTTTGCTTGAAAATGACAATCATGGAAACCTAGTTCCGTCTTTGGCAGAA
GACTGGTCTGTTTCAAGCGACGGTCTAACTTATACCTACAAATTGAGAAAAGATGCCAAATGGTTCACAGCTGATGGTGA
AGAGTACGCCCCAGTCAAGGCACAGGATTTTGTGACAGGTATCAAGTACGCAGTGGATAATAAATCACAGGCGCTTGACT
TGATTCAAAACTCGATCAAGGGCTTGAATGATTACATTACAGGAGCGGATTCTGACTTTTCTAAGGTTGGAGTGAAGGCC
ATCGACGACCAGACTGTTGAGTATACTTTGGCACGCCCAGAACCGTACTGGAACTCAAAAACAACGAACAGTATTCTTTT
CCCAGTAAATGAAGAGTTTCTAAATTCAAAAGGGAAAGATTTTGGAACCCTATCTCCAAATAGCATTCTCTATAGTGGAC
CTTATTTGTTAAAAGATTTCACATCAAAATCATCGATCGAGTATGTGAAAAATCCGCATTACTATGATCATGACAAAGTA
TCGATTGAACACGTAAAATTGGCTTACTTTGATGGCTCAGACCAAGAATTGACCATCCGTAACTTTGAAAGTGGAGCTTA
CTCAATCGCTGGGGTTTATCCAAATAGTTCTAACTTTGCTAAGACAAAGGAGAAATATAAGGATAATATCGTCTATAGCT
TGCAGGACAAGACTTCTTGGTATTTCAATTTCAACGTCAACCGTAAGGCTTACAACCATACGTCTAAAACGACAGATGAG
CAGAAGAAGTCAACTGAGACAGCTGTCTTGAACAAGAACTTCCGTCAAGCAGTGAACTTTGCCTTTGACCGTACAGCCTA
TTCTGCCCAGTCAAATGGGGAAGAAGCAGCTAGCAAGACCCTTCGTAACACCCTAGTGCCTCCTACATTTGTCCAAGTTG
GAGACAAGACCTTTGGAGAAGTAATCGCTTCTAAATTGGTTAACTATGGCACAGAATGGTCAGGTATTAACTTGGCAGAT
GCTCAGGATGCCTATTTCAACAAAGAAAAAGCCCAAGCAAAATTTGCGGAAGCTAAAAAAGAATTGGCAAGTCAAGGTGT
GACCTTCCCAATTCACTTGGATGTGGCAGTTGATCAGACGAGTAAAAATGCTGTGACAGGCATGAACTCAGTTAAGCAGA
CCCTTGAGTCAATTTTGGGTGCTGATAACATTGTCATTGACGTTCAACAACTTTCAACAGATGATTTTAACAACGTAGCC
TTCTTGGCACCGACACCAGCTGATCGTGACTATGATTTGAACTTTGATGGTTGGGTAGGTGACTATCAAGATCCATCAAC
TTATCTCAATCCTTTCAATGCAGAGGATGGATTCTACCTCAAGATCTTTGGTCTAGATGCTCAGGAAGATAAAGCTAAGA
TTGCTAGCTTGGGTCTTGATACCTACACTAAGATGCTTAAAGATGCAGATAGTGAAAATAAAGATGTAGCCAAACGCTAT
GAAAAATATGCTGAAGCACAGGCTTGGATGATTGACAATTCTCTGATTATGTCAGCTATGTCGAGCGGTGGAACAGCATC
TGTAACCAAAGTAACGCCATTTACAAGAGGTTATTCACTAGTCGGCATCAAGGGTGACGGCAATAACTACAAGTACATGA
AGCTGCAAAAAGATACTGTAACAACCAAACAGTATGAAGAAGCTAAAATCAAATGGGAGCAAGAAAGCAAAAAAGCAATC
GAAAAAGCCCAAAAAGAAGCAGAAAATCATGTTAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(74-517)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A387B1B1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

50.381

100

0.508
  amiA Streptococcus salivarius strain HSISS4

50.305

100

0.506
  amiA3 Streptococcus thermophilus LMG 18311

49.924

100

0.503

Multiple sequence alignment