Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   D7D53_RS00190 Genome accession   NZ_CP032621
Coordinates   39782..40414 (+) Length   210 a.a.
NCBI ID   WP_245941799.1    Uniprot ID   -
Organism   Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 34782..45414
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D7D53_RS00180 (D7D53_00180) rpoC 35222..38932 (+) 3711 WP_162927855.1 DNA-directed RNA polymerase subunit beta' -
  D7D53_RS00185 (D7D53_00185) ndk 39229..39651 (+) 423 WP_049510948.1 nucleoside-diphosphate kinase -
  D7D53_RS00190 (D7D53_00190) comM 39782..40414 (+) 633 WP_245941799.1 competence protein Regulator
  D7D53_RS00195 (D7D53_00195) tsaE 40509..40952 (+) 444 WP_004262103.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  D7D53_RS00200 (D7D53_00200) - 40942..41460 (+) 519 WP_120769759.1 GNAT family N-acetyltransferase -
  D7D53_RS00205 (D7D53_00205) brpA 41468..42523 (+) 1056 WP_120769760.1 biofilm formation/cell division transcriptional regulator BrpA -
  D7D53_RS00210 (D7D53_00210) cinA 42601..43857 (+) 1257 WP_120769761.1 competence/damage-inducible protein A Machinery gene
  D7D53_RS00215 (D7D53_00215) recA 43912..45066 (+) 1155 WP_070479987.1 recombinase RecA Machinery gene

Sequence

Protein


Download         Length: 210 a.a.        Molecular weight: 24135.36 Da        Isoelectric Point: 9.4706

>NTDB_id=317164 D7D53_RS00190 WP_245941799.1 39782..40414(+) (comM) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
MMEKMKKQIRILLLLTVFGISSCSCLSLSTWALMLNQNCFYYLVGMLLLASIGAGLNYYRGQGNQSYSVFKEDKQQFLYS
LLLLVNVLGLALIVIEHILAGNTSVEGFVEAFLPSFFFLFGIDLLVFLPIQKYVYGLKKILGKKEMCFISGLVILIILRN
PWSILSMTFYIALGMFFLRLLVPKVIRWEVSFYSHLMRDILLVVFLLFLF

Nucleotide


Download         Length: 633 bp        

>NTDB_id=317164 D7D53_RS00190 WP_245941799.1 39782..40414(+) (comM) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
ATGATGGAAAAAATGAAAAAGCAAATTCGTATTTTGTTATTGCTGACAGTTTTTGGTATTAGTAGCTGTTCTTGTTTAAG
TTTATCGACTTGGGCCTTGATGTTAAATCAAAACTGCTTCTATTATTTAGTTGGCATGTTGCTCCTTGCCAGTATTGGTG
CAGGGTTAAACTACTATAGAGGGCAGGGAAATCAATCTTATTCAGTTTTTAAGGAAGATAAGCAACAATTCTTGTATAGC
CTGTTGCTATTGGTAAATGTTTTGGGTTTAGCTTTAATTGTCATAGAACATATCCTTGCAGGAAATACATCCGTAGAAGG
GTTTGTGGAAGCCTTTCTACCGAGTTTCTTTTTCTTATTTGGTATTGATTTGTTAGTTTTTCTGCCAATTCAGAAGTATG
TATATGGCTTGAAAAAGATTTTGGGTAAGAAGGAAATGTGTTTTATTAGTGGACTAGTTATTTTAATCATTCTTAGAAAT
CCCTGGTCAATATTATCCATGACCTTTTATATTGCCTTGGGAATGTTTTTCTTAAGATTGTTGGTGCCAAAAGTTATTCG
CTGGGAAGTTTCATTTTATAGCCACTTGATGAGAGATATCTTGTTAGTTGTCTTCTTACTGTTTCTATTTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus mitis NCTC 12261

93

95.238

0.886
  comM Streptococcus mitis SK321

89.95

94.762

0.852
  comM Streptococcus pneumoniae D39

40

97.619

0.39
  comM Streptococcus pneumoniae R6

40

97.619

0.39
  comM Streptococcus pneumoniae TIGR4

40

97.619

0.39

Multiple sequence alignment