Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   D7D50_RS06170 Genome accession   NZ_CP032620
Coordinates   1221590..1222594 (+) Length   334 a.a.
NCBI ID   WP_120701744.1    Uniprot ID   -
Organism   Streptococcus koreensis strain KCOM 2890 (=JS71)     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1216590..1227594
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D7D50_RS06150 (D7D50_06150) - 1218177..1219019 (+) 843 WP_120701742.1 metallophosphoesterase family protein -
  D7D50_RS06155 (D7D50_06155) - 1219163..1219612 (+) 450 WP_023023935.1 Rrf2 family transcriptional regulator -
  D7D50_RS06160 (D7D50_06160) - 1219984..1220322 (-) 339 WP_117744506.1 cytochrome O ubiquinol oxidase -
  D7D50_RS06165 (D7D50_06165) - 1220347..1221429 (-) 1083 WP_120701743.1 M24 family metallopeptidase -
  D7D50_RS06170 (D7D50_06170) ccpA 1221590..1222594 (+) 1005 WP_120701744.1 catabolite control protein A Regulator
  D7D50_RS06175 (D7D50_06175) - 1222956..1223954 (+) 999 WP_120701745.1 glycosyltransferase family 4 protein -
  D7D50_RS06180 (D7D50_06180) - 1223956..1225278 (+) 1323 WP_120701746.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 37018.20 Da        Isoelectric Point: 7.4536

>NTDB_id=317143 D7D50_RS06170 WP_120701744.1 1221590..1222594(+) (ccpA) [Streptococcus koreensis strain KCOM 2890 (=JS71)]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIERLDYRPNAVARGLASKKTTTVGVVIPNITNSYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATVNAVTLLAKRNKKIAFVSGPLVDDINGKIRLAGYKDALKAKKLSYSEGLVFESKYRYEEGYNLAERIIASK
ATAAFVTGDELAAGLLNGLADQGVKVPEDFELITSDDSQITRYTRPNLSTVGQPLYDLGAISMRMLTKIMHKEELEEREV
LLAHTINHRGTTKK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=317143 D7D50_RS06170 WP_120701744.1 1221590..1222594(+) (ccpA) [Streptococcus koreensis strain KCOM 2890 (=JS71)]
ATGAATACAGACGATACTGTAACCATTTACGATGTTGCCCGAGAAGCGGGTGTATCAATGGCGACTGTTAGCCGTGTCGT
GAACGGTAATAAGAACGTTAAGGAAAATACTCGTAAAAAAGTATTGGAAGTCATTGAACGTTTGGACTATCGTCCGAATG
CGGTTGCTCGTGGACTTGCGAGTAAGAAAACCACAACGGTAGGTGTTGTGATTCCAAATATTACTAATAGTTACTTCTCT
ACTTTAGCTAAAGGAATTGATGATATCGCAGAAATGTATAAATACAATATCGTCCTTGCCAACAGCGATGAAGACGATGA
TAAAGAAGTTTCTGTTGTCAACACTCTTTTCTCAAAACAAGTCGATGGAATTATATTCATGGGCTACCACTTAACAGAAA
AGATTCGTTCTGAATTCTCTCGTTCTCGAACACCAGTTGTTCTCGCAGGGACAGTCGATGTCGAACATCAATTGCCAAGT
GTCAATATCGATTACAAGCAAGCGACTGTAAATGCGGTTACATTATTGGCTAAACGAAATAAAAAGATTGCTTTTGTAAG
TGGACCATTAGTGGATGATATCAATGGAAAGATTCGCTTGGCTGGCTACAAAGATGCTTTAAAAGCAAAAAAATTGTCTT
ATAGCGAAGGCTTGGTCTTTGAGTCTAAATACCGCTATGAAGAAGGCTATAACTTAGCTGAACGCATCATTGCATCCAAA
GCGACAGCAGCCTTTGTGACTGGGGATGAATTGGCAGCAGGTTTGCTCAATGGTCTAGCTGATCAAGGTGTGAAAGTACC
GGAAGATTTTGAGTTGATTACCAGTGATGATTCACAAATTACACGCTACACTCGTCCAAACCTTTCAACTGTTGGGCAAC
CACTATATGACTTGGGAGCTATCAGTATGCGGATGTTGACAAAAATTATGCATAAAGAAGAATTGGAAGAAAGAGAAGTT
CTTCTTGCCCATACCATCAATCATCGTGGGACCACGAAGAAGTAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(175-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

91.018

100

0.91
  ccpA Streptococcus pneumoniae D39

84.731

100

0.847
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.402

99.102

0.569

Multiple sequence alignment