Detailed information NTG0031682

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPG27_RS01685
• Genome accession: NC_011333
• Coordinates: 344762..345562 (+)
• Length: 266 a.a.
• NCBI ID: WP_000841121.1
• Uniprot ID: B5ZAA1
• Organism: Helicobacter pylori G27
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 339762..350562

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPG27_RS01650 (HPG27_309)	pseH	340263..340805 (+)	543	WP_000742695.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPG27_RS01655 (HPG27_310)	-	340738..341676 (-)	939	WP_000833963.1	tetraacyldisaccharide 4'-kinase	-
HPG27_RS01660 (HPG27_311)	-	341673..342455 (-)	783	WP_001168289.1	NAD+ synthase	-
HPG27_RS01670 (HPG27_312)	ilvC	342703..343695 (+)	993	WP_001207813.1	ketol-acid reductoisomerase	-
HPG27_RS01675 (HPG27_313)	minD	343719..344525 (+)	807	WP_001019094.1	septum site-determining protein MinD	-
HPG27_RS01680 (HPG27_314)	minE	344522..344755 (+)	234	WP_000051414.1	cell division topological specificity factor MinE	-
HPG27_RS01685 (HPG27_315)	dprA	344762..345562 (+)	801	WP_000841121.1	DNA-processing protein DprA	Machinery gene
HPG27_RS01690 (HPG27_316)	dprB	345559..345963 (+)	405	WP_000599171.1	Holliday junction resolvase RuvX	Machinery gene
HPG27_RS01695 (HPG27_317)	-	346081..346764 (+)	684	WP_012552385.1	tetratricopeptide repeat protein	-
HPG27_RS01700 (HPG27_318)	-	346879..347217 (+)	339	WP_000699884.1	hypothetical protein	-
HPG27_RS01705 (HPG27_319)	-	347201..347761 (+)	561	WP_000038882.1	hypothetical protein	-
HPG27_RS08575 (HPG27_320)	-	348014..348448 (+)	435	WP_227985802.1	hypothetical protein	-
HPG27_RS08140	-	348746..349127 (+)	382	Protein_326	DUF1294 domain-containing protein	-
HPG27_RS01725 (HPG27_322)	-	349127..349912 (+)	786	WP_000119824.1	hypothetical protein	-
HPG27_RS01730	-	349902..350090 (+)	189	WP_000426624.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29774.71 Da
• Isoelectric Point: 8.8843

>NTDB_id=31682 HPG27_RS01685 WP_000841121.1 344762..345562(+) (dprA) [Helicobacter pylori G27]
MKSNFQYSALENIPKAFGMLKDPPKKLYCVGDTKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=31682 HPG27_RS01685 WP_000841121.1 344762..345562(+) (dprA) [Helicobacter pylori G27]
ATGAAAAGTAATTTCCAATACAGCGCGCTAGAAAATATCCCTAAAGCCTTTGGCATGCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACCAAGCTTTTGGATGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACGATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGGGGAGCGTTGGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCTACGAA
CAATCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCGTTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTAGTGATCGCTTTAAGCGATGCGGTCATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGTAGTGCGAGATTAGCCCAAAAATACCAAAAACCCTTATTTGTTTTACCCCAACGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGCGCCAAAAACCCGAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATATCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

3D structure

• AlphaFold DB: B5ZAA1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.992	100	0.97
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	49.537	81.203	0.402