Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   KAN01_RS02035 Genome accession   NZ_CP038816
Coordinates   426510..428555 (-) Length   681 a.a.
NCBI ID   WP_135924498.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis strain KAN01     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 421510..433555
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KAN01_RS02000 (KAN01_02000) - 421986..422669 (+) 684 WP_135924496.1 outer membrane lipid asymmetry maintenance protein MlaD -
  KAN01_RS02005 (KAN01_02005) - 422696..423337 (+) 642 WP_002049753.1 phospholipid-binding protein MlaC -
  KAN01_RS02010 (KAN01_02010) - 423349..423636 (+) 288 WP_000250997.1 lipid asymmetry maintenance protein MlaB -
  KAN01_RS02015 (KAN01_02015) - 423711..424724 (-) 1014 WP_002049699.1 CorA family divalent cation transporter -
  KAN01_RS02020 (KAN01_02020) - 424882..425463 (+) 582 WP_002049746.1 TIGR00730 family Rossman fold protein -
  KAN01_RS02025 (KAN01_02025) - 425478..425879 (+) 402 WP_004711784.1 NUDIX hydrolase -
  KAN01_RS02030 (KAN01_02030) comF 425882..426517 (-) 636 WP_025469374.1 ComF family protein Machinery gene
  KAN01_RS02035 (KAN01_02035) recG 426510..428555 (-) 2046 WP_135924498.1 ATP-dependent DNA helicase RecG Machinery gene
  KAN01_RS02040 (KAN01_02040) - 428576..429391 (+) 816 WP_032011502.1 NAD(P)H-binding protein -
  KAN01_RS02045 (KAN01_02045) adeT2 429470..430456 (+) 987 WP_032011503.1 putative multidrug efflux protein AdeT2 -
  KAN01_RS02050 (KAN01_02050) plsB 430499..433072 (-) 2574 WP_032011504.1 glycerol-3-phosphate 1-O-acyltransferase PlsB -

Sequence

Protein


Download         Length: 681 a.a.        Molecular weight: 76469.06 Da        Isoelectric Point: 7.6982

>NTDB_id=316073 KAN01_RS02035 WP_135924498.1 426510..428555(-) (recG) [Acinetobacter nosocomialis strain KAN01]
MTSVHQLQGVGSASAALLEKLNIFTTDDLLFHLPRDYEDRSTIIPMNQLVVGRSYLLEGEVKSVDFPPGKRKSMAALIQD
EFGKVTLRFYHIYKNLTDKIKLGNRLRIFGEVRVGARGLELYHPEIQLINEHTPLPKTQLTAIYPSTDGLTQPKLREYVK
QALKHHSDALPELLPKQYTNGYALKEALHYIHEPPVDANMIQLAQGSHPAQQRLIFEELVAHQISLLTRRAYIRQIASPA
FPSSKVLAKKLLEALPFQMTNAQKRVSKEILSDLKQHQPMLRLVQGDVGAGKTLVAAVAACHALEADWQVALMAPTEILA
EQHYLNFKRWFEPLGITVAWLSGKQKGKARTQAEQQIKEGQAELIVGTHALFQDNVEFAKLGLVIIDEQHRFGVDQRLAL
RNKGAEQLTPHQLVMTATPIPRTLAMSAYGDLDTSIIDELPPGRTPIQTVTIPLDRREEVLNRIATNCREGKQAYWVCTL
VEQSETLDAQAAEATYQEMKERFPELNIGLVHGKMKADEKQSVMQAFKNNELQLLIATTVIEVGVDVPNASIMVIENAER
LGLSQLHQLRGRVGRGAKASFCVLLYKPPLSQNGQERLSILRESNDGFVIAEKDLELRGPGELLGTKQTGDMGFRVARLE
RDDHLLSQAHYVAQQVLKDYPEQADALLKRWLPEAPRYAYV

Nucleotide


Download         Length: 2046 bp        

>NTDB_id=316073 KAN01_RS02035 WP_135924498.1 426510..428555(-) (recG) [Acinetobacter nosocomialis strain KAN01]
ATGACTTCAGTCCATCAGTTACAAGGCGTTGGATCGGCTTCAGCAGCCCTACTCGAAAAACTAAATATTTTTACCACAGA
TGATTTACTGTTTCATCTGCCCCGTGATTATGAAGATCGCAGTACCATTATTCCTATGAATCAATTGGTGGTTGGTCGTA
GTTATTTACTCGAGGGTGAAGTCAAATCTGTTGATTTCCCTCCAGGTAAACGTAAATCTATGGCCGCATTAATACAAGAT
GAATTTGGTAAGGTGACTTTACGCTTTTATCATATTTATAAAAATTTAACCGACAAAATAAAACTTGGTAACCGTTTACG
TATTTTTGGTGAAGTTCGCGTAGGTGCACGAGGACTTGAGCTTTATCATCCAGAAATTCAGCTCATTAATGAGCATACGC
CTCTACCCAAAACGCAGCTCACGGCAATTTACCCAAGTACTGATGGTTTAACGCAACCTAAGTTACGTGAATATGTTAAA
CAAGCGTTGAAGCATCATAGTGATGCTCTACCTGAGCTGCTTCCTAAACAATATACAAATGGATACGCACTCAAAGAAGC
CCTACATTACATTCATGAGCCACCTGTCGATGCCAATATGATTCAATTGGCCCAAGGGTCTCATCCTGCTCAGCAACGCC
TTATTTTTGAAGAGTTGGTCGCACATCAAATTAGCCTTCTCACGCGACGTGCTTATATTCGTCAAATTGCCTCACCTGCT
TTTCCGAGTAGTAAAGTACTTGCAAAAAAACTGTTAGAAGCTCTTCCCTTTCAAATGACCAACGCACAAAAGCGTGTATC
AAAAGAAATTTTAAGCGACTTAAAACAACACCAACCGATGTTACGCTTGGTACAAGGTGATGTAGGTGCAGGTAAAACTT
TAGTTGCGGCAGTTGCGGCATGTCATGCCTTAGAAGCAGATTGGCAAGTTGCCTTAATGGCACCTACCGAAATTTTAGCA
GAGCAGCATTATTTAAATTTTAAACGCTGGTTTGAACCTTTAGGTATTACAGTAGCTTGGCTGTCAGGCAAACAAAAAGG
TAAAGCACGAACACAAGCTGAACAACAAATCAAAGAAGGCCAGGCCGAGCTTATTGTAGGTACGCATGCTTTGTTTCAAG
ATAATGTTGAGTTTGCCAAACTAGGGCTCGTGATTATTGATGAGCAGCACCGCTTTGGGGTGGATCAACGATTAGCCTTA
CGCAACAAAGGTGCAGAACAACTCACACCACATCAACTCGTCATGACTGCAACGCCAATTCCTAGAACATTAGCAATGAG
TGCTTATGGCGATTTGGATACATCGATTATTGATGAATTGCCGCCAGGCCGAACTCCAATTCAGACCGTCACAATTCCGC
TAGATCGTCGTGAAGAAGTGCTAAATCGAATTGCTACAAATTGCCGAGAAGGTAAACAAGCCTACTGGGTATGTACTCTG
GTTGAACAGTCCGAAACTTTAGATGCTCAAGCTGCGGAAGCCACTTATCAAGAAATGAAAGAGCGCTTTCCTGAACTTAA
TATTGGTTTGGTTCATGGCAAAATGAAAGCTGATGAAAAGCAATCTGTCATGCAAGCATTTAAAAACAATGAACTTCAAC
TGCTAATTGCAACAACTGTTATTGAGGTTGGGGTAGATGTACCTAATGCCTCAATTATGGTCATTGAAAATGCTGAACGC
TTAGGTCTTTCACAACTACACCAATTACGAGGTCGTGTCGGACGAGGTGCAAAGGCTAGTTTTTGTGTTCTTCTCTATAA
ACCCCCACTTTCACAAAATGGGCAAGAAAGACTTTCAATTTTAAGAGAAAGTAACGACGGCTTTGTCATTGCTGAAAAAG
ACCTTGAATTACGAGGTCCGGGTGAATTATTAGGAACAAAACAGACAGGTGATATGGGCTTCCGTGTCGCACGTTTAGAA
CGAGATGATCATTTACTGAGTCAAGCACATTACGTCGCACAACAAGTTCTAAAAGATTACCCTGAGCAAGCTGACGCCCT
CTTAAAACGCTGGCTACCTGAAGCACCTCGATATGCTTATGTTTAA

Domains

Predicted by InterProScan.

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(605-663)

RecG wedge domain (RecG_wedge)

(7-163)

DEAD/DEAH box helicase (DEAD)

(261-422)

Helicase conserved C-terminal domain (Helicase_C)

(466-576)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

50.075

98.238

0.492
  recG/mmsA Streptococcus pneumoniae R6

41.504

97.651

0.405
  recG/mmsA Streptococcus pneumoniae R36A

41.504

97.651

0.405
  recG Bacillus subtilis subsp. subtilis str. 168

38.719

100

0.391