Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | CTI32_RS01795 | Genome accession | NZ_CP032308 |
| Coordinates | 62081..62593 (+) | Length | 170 a.a. |
| NCBI ID | WP_002288368.1 | Uniprot ID | - |
| Organism | Enterococcus faecium strain HY07 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 57081..67593
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CTI32_RS01785 (CTI32_01785) | gyrA | 58728..61199 (+) | 2472 | WP_002309898.1 | DNA gyrase subunit A | - |
| CTI32_RS01790 (CTI32_01790) | rpsF | 61731..62030 (+) | 300 | WP_002288366.1 | 30S ribosomal protein S6 | - |
| CTI32_RS01795 (CTI32_01795) | ssb | 62081..62593 (+) | 513 | WP_002288368.1 | single-stranded DNA-binding protein | Machinery gene |
| CTI32_RS01800 (CTI32_01800) | rpsR | 62619..62855 (+) | 237 | WP_002288370.1 | 30S ribosomal protein S18 | - |
| CTI32_RS01805 (CTI32_01805) | - | 62998..64971 (+) | 1974 | WP_119364695.1 | DHH family phosphoesterase | - |
| CTI32_RS01810 (CTI32_01810) | rplI | 64977..65429 (+) | 453 | WP_002288372.1 | 50S ribosomal protein L9 | - |
| CTI32_RS01815 (CTI32_01815) | dnaB | 65704..67071 (+) | 1368 | WP_002288373.1 | replicative DNA helicase | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 18451.99 Da Isoelectric Point: 4.6742
>NTDB_id=314811 CTI32_RS01795 WP_002288368.1 62081..62593(+) (ssb) [Enterococcus faecium strain HY07]
MINNVVLVGRLTKDPDLRYTASGTAVATFTLAVNRNFTNQSGNREADFINCVIWRKSAETLANYARKGTLLGVTGRIQTR
SYDNQQGQRVYVTEVVADNFQLLESRSASENRQQSGGFQSSGQSAGGFGGNNNSNQTSQSSNGMPDFDRDTSDPFGSSST
IDISDDDLPF
MINNVVLVGRLTKDPDLRYTASGTAVATFTLAVNRNFTNQSGNREADFINCVIWRKSAETLANYARKGTLLGVTGRIQTR
SYDNQQGQRVYVTEVVADNFQLLESRSASENRQQSGGFQSSGQSAGGFGGNNNSNQTSQSSNGMPDFDRDTSDPFGSSST
IDISDDDLPF
Nucleotide
Download Length: 513 bp
>NTDB_id=314811 CTI32_RS01795 WP_002288368.1 62081..62593(+) (ssb) [Enterococcus faecium strain HY07]
TTGATTAATAATGTTGTATTAGTTGGACGTCTGACGAAAGATCCAGATTTGCGTTACACAGCAAGTGGTACGGCAGTCGC
AACATTTACTTTGGCTGTGAATCGTAATTTTACAAACCAAAGCGGCAATCGCGAGGCTGATTTTATCAACTGTGTGATTT
GGCGCAAATCAGCAGAAACTTTAGCAAACTATGCTCGTAAAGGAACACTTTTAGGTGTTACTGGACGTATCCAAACTCGT
TCTTATGATAATCAGCAAGGACAACGTGTATACGTGACAGAAGTAGTAGCTGACAACTTCCAATTGCTGGAAAGTCGTTC
TGCATCTGAAAATCGCCAACAAAGCGGCGGATTCCAAAGTTCTGGTCAATCAGCTGGCGGATTTGGCGGAAACAATAACT
CTAATCAAACATCTCAATCATCCAACGGTATGCCTGATTTCGACCGTGATACTTCTGACCCATTCGGCTCAAGTTCAACG
ATCGACATTTCAGATGATGATTTACCATTCTAA
TTGATTAATAATGTTGTATTAGTTGGACGTCTGACGAAAGATCCAGATTTGCGTTACACAGCAAGTGGTACGGCAGTCGC
AACATTTACTTTGGCTGTGAATCGTAATTTTACAAACCAAAGCGGCAATCGCGAGGCTGATTTTATCAACTGTGTGATTT
GGCGCAAATCAGCAGAAACTTTAGCAAACTATGCTCGTAAAGGAACACTTTTAGGTGTTACTGGACGTATCCAAACTCGT
TCTTATGATAATCAGCAAGGACAACGTGTATACGTGACAGAAGTAGTAGCTGACAACTTCCAATTGCTGGAAAGTCGTTC
TGCATCTGAAAATCGCCAACAAAGCGGCGGATTCCAAAGTTCTGGTCAATCAGCTGGCGGATTTGGCGGAAACAATAACT
CTAATCAAACATCTCAATCATCCAACGGTATGCCTGATTTCGACCGTGATACTTCTGACCCATTCGGCTCAAGTTCAACG
ATCGACATTTCAGATGATGATTTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.322 |
100 |
0.618 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
56.983 |
100 |
0.6 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
62.264 |
62.353 |
0.388 |