Detailed information NTG0314763

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: CDG62_RS18180
• Genome accession: NZ_CP032286
• Coordinates: 3200535..3201899 (+)
• Length: 454 a.a.
• NCBI ID: WP_265936539.1
• Uniprot ID: -
• Organism: Acinetobacter sp. WCHA55
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 3195535..3206899

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CDG62_RS18160 (CDG62_18165)	thrC	3195741..3196880 (+)	1140	WP_004692833.1	threonine synthase	-
CDG62_RS18165 (CDG62_18170)	-	3196966..3198021 (-)	1056	WP_162904050.1	serine hydrolase	-
CDG62_RS18170 (CDG62_18175)	-	3198237..3198872 (+)	636	WP_004692836.1	response regulator	-
CDG62_RS18175 (CDG62_18180)	pilS	3198894..3200462 (+)	1569	WP_087528360.1	sensor histidine kinase	Regulator
CDG62_RS18180 (CDG62_18185)	pilR	3200535..3201899 (+)	1365	WP_265936539.1	sigma-54-dependent transcriptional regulator	Regulator
CDG62_RS18185 (CDG62_18190)	-	3201904..3203079 (-)	1176	WP_087528362.1	S41 family peptidase	-
CDG62_RS18190 (CDG62_18195)	gpmI	3203098..3204645 (-)	1548	WP_087528363.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
CDG62_RS18195 (CDG62_18200)	lptG	3204769..3205839 (-)	1071	WP_087528364.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 454 a.a.
• Molecular weight: 50903.58 Da
• Isoelectric Point: 6.8270

>NTDB_id=314763 CDG62_RS18180 WP_265936539.1 3200535..3201899(+) (pilR) [Acinetobacter sp. WCHA55]
MQMSLSRMGIDTHIAYRLQEAVQALKTHQYDACLTDLNLPDGNGLSLVDFIAQNYPNLPVAVLTAYGNMDVAIAALKAGA
FDFVSKPINQKHLEQLLQKAFNQPISQLHIQEDTLEHKLLIGQSLPIQQLRVTLKKIARSQAPVFITGESGTGKEVVANL
VHRLSNRNEGPFIAINCGAIPTELMESELFGHRKGSFTGATQDKQGLILSAHGGSLFLDEIAELPLTMQVKLLRAVQEKR
IRPIGSDTEIDVDFRVISASHQDLEALVQQGKFRQDLYFRIHVMDIVLPALRERGNDIILLAQHFIQKICQEWDIPVKTL
SERAREFLLAQYYPGNVRELRNMMERAITLSDESSIDLTHLQTAPLRPIAQASYTNATQQGAIGTDQLSPVPSRKLPEEG
LELYLEKIEKEILMNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDGEDDSV

Nucleotide

• Length: 1365 bp

>NTDB_id=314763 CDG62_RS18180 WP_265936539.1 3200535..3201899(+) (pilR) [Acinetobacter sp. WCHA55]
ATGCAAATGTCTTTAAGTCGAATGGGGATTGATACACATATTGCCTATCGTTTACAAGAGGCGGTTCAAGCCCTGAAAAC
GCATCAATACGATGCCTGTCTAACCGATCTTAATTTACCTGATGGTAATGGCCTGAGCTTGGTCGATTTTATTGCTCAAA
ATTATCCTAATCTACCTGTAGCTGTATTAACTGCTTATGGCAACATGGATGTCGCGATTGCCGCACTTAAAGCCGGAGCT
TTTGATTTTGTCAGCAAACCGATCAACCAAAAGCATTTAGAACAACTTTTACAAAAAGCCTTTAACCAGCCTATCAGCCA
GCTACATATTCAAGAAGATACGCTTGAACACAAACTGTTAATTGGTCAATCCCTTCCTATTCAACAGCTTCGTGTGACCT
TGAAAAAAATTGCCCGCTCACAAGCCCCTGTCTTTATTACAGGTGAATCGGGGACTGGCAAAGAAGTGGTGGCGAATCTG
GTACATCGCCTGAGCAACCGTAATGAAGGGCCGTTTATTGCCATTAATTGTGGTGCTATCCCGACAGAACTGATGGAAAG
TGAACTATTTGGACATCGTAAAGGTAGTTTTACAGGGGCAACCCAAGACAAACAAGGGCTGATTCTCTCTGCACATGGTG
GCAGTCTATTTTTAGATGAAATTGCAGAACTGCCACTAACCATGCAAGTTAAACTCTTACGTGCAGTACAAGAAAAGCGT
ATTCGTCCCATTGGTAGTGACACCGAAATTGATGTTGATTTCCGTGTGATTAGTGCCAGCCATCAAGACTTAGAAGCACT
TGTACAACAAGGTAAATTCCGTCAGGACTTATATTTCCGCATCCATGTTATGGACATTGTACTGCCTGCCCTACGTGAGC
GCGGCAATGACATTATTCTTTTGGCACAGCATTTCATTCAAAAAATCTGTCAAGAGTGGGACATCCCGGTCAAAACCCTA
AGTGAACGTGCACGTGAGTTTTTATTGGCCCAATATTATCCGGGTAATGTGCGTGAACTGCGCAATATGATGGAACGTGC
CATCACTTTAAGTGATGAAAGCAGTATTGACTTAACGCACTTGCAAACCGCCCCTCTGCGACCAATAGCACAAGCCAGCT
ATACTAATGCCACACAACAGGGTGCGATTGGTACTGATCAACTTAGCCCTGTGCCTTCACGCAAATTACCTGAAGAAGGT
TTAGAGCTGTATTTAGAAAAAATTGAAAAAGAAATTTTGATGAATGCACTCAATCTCACCCACTGGAACCGAACACTGGC
GGCTAAAAAGCTCGGCATGTCTTTCCGTTCTTTACGTTATCGCTTGAAAAAATTCGGACTCGATGGCGAAGACGATTCCG
TTTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (4-97)

• Bacterial regulatory protein, Fis family (HTH_8) (405-445)

• Sigma-54 interaction domain (Sigma54_activat) (120-286)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	74.558	99.559	0.742
pilR	Pseudomonas aeruginosa PAK	48.438	98.678	0.478