Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   CDG62_RS08030 Genome accession   NZ_CP032286
Coordinates   1080329..1081036 (-) Length   235 a.a.
NCBI ID   WP_004696183.1    Uniprot ID   A0A7H8SJ59
Organism   Acinetobacter sp. WCHA55     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1075329..1086036
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CDG62_RS08010 (CDG62_08015) - 1076182..1077501 (+) 1320 WP_087526549.1 adenylosuccinate synthase -
  CDG62_RS08015 (CDG62_08020) - 1077702..1078007 (+) 306 WP_087526548.1 hypothetical protein -
  CDG62_RS08020 (CDG62_08025) - 1078194..1078967 (+) 774 WP_004982314.1 M48 family metallopeptidase -
  CDG62_RS08025 (CDG62_08030) - 1079092..1080141 (-) 1050 WP_087526547.1 NADP(H)-dependent aldo-keto reductase -
  CDG62_RS08030 (CDG62_08035) crp 1080329..1081036 (-) 708 WP_004696183.1 cAMP-activated global transcriptional regulator CRP Regulator
  CDG62_RS08035 (CDG62_08040) - 1081184..1081606 (+) 423 WP_087526546.1 OsmC family protein -
  CDG62_RS08040 (CDG62_08045) clpB 1081997..1084576 (+) 2580 WP_087526545.1 ATP-dependent chaperone ClpB -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 26414.97 Da        Isoelectric Point: 4.6788

>NTDB_id=314740 CDG62_RS08030 WP_004696183.1 1080329..1081036(-) (crp) [Acinetobacter sp. WCHA55]
MTSSFSQLSTDALSPGQLPESVKALLKRAYINRYPKRTTIVDAGSESKSLYLILKGSVSIILREDDEREIVVAYLNAGDF
FGEMGLFEANSQRTAEVRTRDVCEIAEVTYENFHELSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDASLEESKANADDYEDEE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=314740 CDG62_RS08030 WP_004696183.1 1080329..1081036(-) (crp) [Acinetobacter sp. WCHA55]
ATGACTTCAAGCTTTTCACAATTAAGCACTGATGCGCTGTCTCCAGGTCAACTCCCCGAGTCAGTCAAAGCATTATTAAA
ACGCGCATATATTAATCGTTATCCTAAGCGTACCACCATCGTAGATGCAGGCTCAGAATCTAAATCTTTATATTTGATTT
TAAAAGGTTCGGTCTCCATTATTCTGCGTGAAGACGATGAACGTGAAATCGTGGTCGCTTATTTAAATGCGGGTGATTTT
TTTGGGGAAATGGGGCTATTCGAAGCAAACTCACAACGTACAGCTGAAGTGCGTACACGTGATGTCTGCGAAATTGCTGA
AGTGACTTATGAAAACTTCCATGAACTCAGCAAGCAATACCCTGACCTAAGCTATGCAGTATTTGCACAGCTTGTACGCC
GTCTAAAAAATACCACTCGTAAAGTGACTGACCTTGCATTTATCGATGTTTCAGGTCGTATTGCACGTTGCCTAATCGAC
TTATCTTCGCAACCTGAAGCGATGATTTTGCCAAATGGACGTCAAATTCGTATTACCCGTCAAGAAATTGGACGTATTGT
CGGTTGTTCACGTGAAATGGTCGGTCGTGTCTTAAAAACACTTGAAGAGCAAGGCATGATCGAAACTGATGGTAAAGCCA
TCTTAATTTTTGATGCCTCTTTAGAAGAGTCAAAAGCGAATGCTGATGACTATGAAGACGAAGAATAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Bacterial regulatory proteins, crp family (Crp)

(176-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H8SJ59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

91.064

100

0.911
  crp Vibrio cholerae strain A1552

46.602

87.66

0.409
  crp Haemophilus influenzae Rd KW20

48.205

82.979

0.4

Multiple sequence alignment