Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   BEN74_RS07280 Genome accession   NZ_CP032279
Coordinates   1183849..1184232 (-) Length   127 a.a.
NCBI ID   WP_068907259.1    Uniprot ID   -
Organism   Acinetobacter sp. WCHAc010034     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1178849..1189232
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BEN74_RS07265 (BEN74_07265) - 1180796..1182868 (-) 2073 WP_068907266.1 methyl-accepting chemotaxis protein -
  BEN74_RS07270 (BEN74_07270) - 1182911..1183447 (-) 537 WP_068907264.1 chemotaxis protein CheW -
  BEN74_RS07275 (BEN74_07275) - 1183454..1183822 (-) 369 WP_068907262.1 response regulator -
  BEN74_RS07280 (BEN74_07280) pilG 1183849..1184232 (-) 384 WP_068907259.1 twitching motility response regulator PilG Regulator
  BEN74_RS07285 (BEN74_07285) - 1184512..1185159 (+) 648 WP_068907256.1 hypothetical protein -
  BEN74_RS07290 (BEN74_07290) - 1185446..1186147 (+) 702 WP_005005861.1 IS1 family transposase -
  BEN74_RS07295 (BEN74_07295) - 1186284..1187999 (+) 1716 WP_068910942.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14197.27 Da        Isoelectric Point: 4.7172

>NTDB_id=314696 BEN74_RS07280 WP_068907259.1 1183849..1184232(-) (pilG) [Acinetobacter sp. WCHAc010034]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFEALAKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVVMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVTA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=314696 BEN74_RS07280 WP_068907259.1 1183849..1184232(-) (pilG) [Acinetobacter sp. WCHAc010034]
ATGGACGATAAATTCCAAAATCTAAAAGTCATGGTGATTGATGATTCAAAAACCATCCGCCGCACAGCGGAAACGCTTCT
CCAGCGTGAAGGATGCGAAGTTGTGACTGCAGTCGACGGCTTTGAAGCTTTGGCTAAAATTGCCGAAGCGAATCCGGATA
TTGTATTTGTAGATATCATGATGCCCCGTCTGGACGGCTATCAAACCTGCGCCTTAATCAAGAATTCGCAAAATTATCAG
AATATTCCTGTCGTTATGCTTTCAAGCAAAGACGGCTTGTTTGACCAGGCTAAAGGGCGGGTTGTCGGTTCGGACGAATA
TTTAACTAAACCGTTCAGCAAAGATGAATTGCTGAACGCTATCCGTAATCACGTAACCGCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

94.488

100

0.945
  vicR Streptococcus mutans UA159

40.171

92.126

0.37
  pilH Synechocystis sp. PCC 6803

40.708

88.976

0.362

Multiple sequence alignment