Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   D2M30_RS15675 Genome accession   NZ_CP032146
Coordinates   3076505..3078796 (-) Length   763 a.a.
NCBI ID   WP_088613350.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain YP6     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3071505..3083796
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D2M30_RS15635 (D2M30_15650) - 3071965..3072396 (+) 432 WP_045509497.1 Na(+)/H(+) antiporter subunit B -
  D2M30_RS15640 (D2M30_15655) - 3072396..3072737 (+) 342 WP_013353388.1 Na(+)/H(+) antiporter subunit C -
  D2M30_RS15645 (D2M30_15660) - 3072730..3074211 (+) 1482 WP_065522134.1 Na+/H+ antiporter subunit D -
  D2M30_RS15650 (D2M30_15665) - 3074217..3074693 (+) 477 WP_013353390.1 Na+/H+ antiporter subunit E -
  D2M30_RS15655 (D2M30_15670) - 3074693..3074977 (+) 285 WP_045509491.1 Na(+)/H(+) antiporter subunit F1 -
  D2M30_RS15660 (D2M30_15675) mnhG 3074961..3075335 (+) 375 WP_045509488.1 monovalent cation/H(+) antiporter subunit G -
  D2M30_RS15665 (D2M30_15680) - 3075375..3075758 (-) 384 WP_045509485.1 hotdog fold thioesterase -
  D2M30_RS15670 (D2M30_15685) comA 3075780..3076424 (-) 645 WP_014472195.1 response regulator transcription factor Regulator
  D2M30_RS15675 (D2M30_15690) comP 3076505..3078796 (-) 2292 WP_088613350.1 histidine kinase Regulator
  D2M30_RS15680 (D2M30_15695) comX 3078808..3078972 (-) 165 WP_007613432.1 competence pheromone ComX -
  D2M30_RS15685 (D2M30_15700) - 3078972..3079883 (-) 912 WP_125123647.1 polyprenyl synthetase family protein -
  D2M30_RS15690 (D2M30_15705) degQ 3080035..3080175 (-) 141 WP_013353398.1 degradation enzyme regulation protein DegQ Regulator
  D2M30_RS15700 (D2M30_15715) - 3080640..3080981 (+) 342 WP_045509476.1 hypothetical protein -
  D2M30_RS15705 (D2M30_15720) - 3080988..3082211 (-) 1224 WP_013353400.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 763 a.a.        Molecular weight: 88450.67 Da        Isoelectric Point: 7.4202

>NTDB_id=314046 D2M30_RS15675 WP_088613350.1 3076505..3078796(-) (comP) [Bacillus amyloliquefaciens strain YP6]
MKSKYNKISVVLILLTLVYVIYLTYISTNNLLVGATISQNKQGEIKIKDVEDFTMAYYAGVQKGDIVKNINHQNVKSINI
QMNKLKNVNSMVVDRNGHDIEIKLNLFNDRNFSTYLIPIIFYVVCLFCCFFIIKINEEKNLKSALVLIVFLLSASIAYIS
AGGSAKGDLLSRCIMLLTLITVPLNYLLFLYHYFKELGTVLFSKKVFVLYLFPTINILFELFRSQLSFGDFIPKFNLISF
FLLFLIVAYYFIVILRRNKDTDQAHIIKVLVVINILAFSPFLCLYLIPYVFFNDYYVSSFLTASFMLLIPFSLVYQFMSN
KIYNVDFILSKLKYYGFLALTPTIILVTTIELLREPEENFYNLKLTFLIYILMLAVFYYKEILDFRFKLKRVSERFNYQD
SIYKFTQLIRNSSSLNQVFGELKTTILEVTLTSKVYIFEVTYDGNVKAFDERDSSLIDDYQVLLNSVTVEIGKITEFNQG
FAMKVGERGDRSFVVLCLSKMNTPRLSREEISWLKTLSFYVNVSIENVMKIEELMNHLEDLKKQETNPVWLKKLMFTIEE
KQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCHIEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGLVKA
VSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGCNQE
EGSGQAMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2292 bp        

>NTDB_id=314046 D2M30_RS15675 WP_088613350.1 3076505..3078796(-) (comP) [Bacillus amyloliquefaciens strain YP6]
ATGAAGTCCAAGTACAATAAGATTTCAGTTGTCTTAATTCTGCTTACATTGGTATATGTCATTTATCTGACTTATATAAG
CACAAATAATCTTTTAGTCGGCGCCACAATTTCTCAAAATAAACAGGGCGAAATTAAAATAAAAGATGTAGAAGATTTTA
CAATGGCATATTACGCCGGAGTGCAAAAGGGAGATATAGTAAAGAATATTAACCACCAAAATGTAAAGTCAATTAATATT
CAAATGAATAAGCTGAAAAATGTAAACTCTATGGTCGTTGATAGAAACGGTCATGATATTGAGATTAAGCTCAATTTATT
TAATGATAGGAACTTCAGTACTTACTTAATACCGATAATTTTTTATGTAGTATGTTTATTTTGCTGTTTCTTCATCATCA
AAATAAATGAAGAAAAAAACTTAAAATCTGCTTTGGTACTAATTGTATTTCTTTTGTCTGCTTCAATTGCATATATTAGT
GCTGGAGGGTCGGCAAAAGGTGATTTGCTCAGCAGATGTATCATGTTGTTAACATTAATAACTGTACCATTAAATTATCT
TCTGTTTCTTTATCATTACTTTAAAGAATTAGGTACAGTGCTTTTCAGCAAAAAAGTTTTTGTGTTGTATTTATTTCCAA
CTATAAATATATTATTTGAATTATTTCGGTCGCAATTATCTTTTGGCGATTTTATTCCAAAATTTAATTTGATTTCGTTT
TTTCTTCTTTTTTTAATTGTAGCATATTATTTTATTGTTATTTTGAGAAGAAACAAAGATACTGATCAGGCACATATTAT
AAAGGTGCTTGTAGTTATAAATATATTGGCATTTTCGCCTTTTTTATGTCTGTATCTTATACCATATGTATTTTTTAATG
ATTATTATGTCTCTTCTTTCTTAACAGCATCATTTATGCTGCTAATACCTTTTTCACTTGTATATCAATTCATGTCGAAT
AAAATATATAACGTTGATTTTATCTTAAGTAAGTTAAAATATTACGGCTTTTTAGCTTTAACCCCAACTATAATTCTGGT
TACGACAATAGAGTTATTACGTGAGCCGGAAGAAAATTTTTACAATCTAAAACTGACATTTCTAATATACATTTTAATGT
TAGCTGTTTTTTATTATAAAGAAATACTCGATTTCCGGTTTAAATTAAAAAGGGTCTCAGAAAGATTCAATTACCAAGAC
AGTATATACAAGTTTACCCAATTAATCAGAAACTCGTCTTCTTTAAATCAGGTTTTTGGAGAATTAAAAACGACCATTCT
CGAAGTAACTCTTACGAGTAAAGTGTATATATTTGAAGTCACGTATGATGGGAATGTAAAGGCATTTGACGAAAGAGATT
CAAGTTTGATAGATGATTATCAAGTTCTTTTAAATAGTGTTACTGTTGAGATAGGAAAAATAACGGAGTTTAATCAAGGT
TTCGCAATGAAAGTAGGAGAGCGGGGAGATAGATCTTTCGTTGTTCTCTGTTTGTCTAAGATGAATACGCCCCGCTTATC
ACGTGAAGAAATTTCTTGGTTAAAAACATTATCTTTTTACGTTAATGTTTCAATAGAAAACGTGATGAAAATCGAAGAAC
TTATGAATCATCTCGAAGATTTAAAGAAACAGGAGACAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACGATTGAGGAA
AAGCAGCGGTCGGATTTGGCCCGTGATCTGCATGATTCGGTGCTGCAGGATTTGATTTCTTTGAAACGCCAGTGTGAGCT
GTTTCTGGCCGATTTTAAGAAAGAAGAGCCTTGTCACATAGAGGTGCAGGACAAGCTTCATCAGATGAATGAGCAGATGT
CGGATGTCATTTTGATGACCCGGGAGACGTGCCACGAGCTTCGGCCTCAGCTGCTGTATGATTTGGGTCTGGTGAAGGCG
GTATCCAAGCTTGCAGCTCAGCAGCAGGAGCGTGCTCCGTTTCATATCCGTCTGAATACGGGACGGTTTACGGCGGCGCT
GGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAATGCCATGAAGCATTCACAGGCGAATG
AGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGATGACGGGGTCGGATGCAATCAGGAA
GAAGGCAGCGGACAGGCGATGAGCATGGGGCTTTCGGGTATTAAGGAGCGCGTCCGGGCGCTTGACGGCCGGATGAAAAT
CGACACAAGTGAAGGAAATGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(563-632)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

53.896

100

0.544

Multiple sequence alignment