Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   CDG61_RS12815 Genome accession   NZ_CP032143
Coordinates   2607942..2612570 (-) Length   1542 a.a.
NCBI ID   WP_087549444.1    Uniprot ID   -
Organism   Acinetobacter sp. WCHAc010052     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2602942..2617570
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CDG61_RS12785 (CDG61_12785) elsL 2604014..2604517 (-) 504 WP_087549440.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  CDG61_RS12790 (CDG61_12790) - 2604527..2604901 (-) 375 WP_087549441.1 YbaN family protein -
  CDG61_RS12795 (CDG61_12795) - 2604991..2605899 (+) 909 WP_087549442.1 DUF1853 family protein -
  CDG61_RS12800 (CDG61_12800) - 2605989..2606132 (+) 144 WP_171405459.1 entericidin A/B family lipoprotein -
  CDG61_RS12805 (CDG61_12805) dapE 2606250..2607383 (+) 1134 WP_087549443.1 succinyl-diaminopimelate desuccinylase -
  CDG61_RS12810 (CDG61_12810) - 2607484..2607945 (-) 462 WP_087513336.1 hypothetical protein -
  CDG61_RS12815 (CDG61_12815) chpA 2607942..2612570 (-) 4629 WP_087549444.1 Hpt domain-containing protein Regulator
  CDG61_RS12820 (CDG61_12820) - 2612722..2614794 (-) 2073 WP_087513334.1 methyl-accepting chemotaxis protein -
  CDG61_RS12825 (CDG61_12825) - 2614836..2615372 (-) 537 WP_087549445.1 chemotaxis protein CheW -
  CDG61_RS12830 (CDG61_12830) - 2615376..2615744 (-) 369 WP_087513332.1 response regulator -
  CDG61_RS12835 (CDG61_12835) pilG 2615782..2616168 (-) 387 WP_087513331.1 twitching motility response regulator PilG Regulator
  CDG61_RS12840 (CDG61_12840) - 2616531..2617085 (+) 555 WP_087549651.1 hypothetical protein -

Sequence


Protein


Download         Length: 1542 a.a.        Molecular weight: 171854.73 Da        Isoelectric Point: 4.1927

>NTDB_id=313873 CDG61_RS12815 WP_087549444.1 2607942..2612570(-) (chpA) [Acinetobacter sp. WCHAc010052]
MKEILKNLVENTTLPEDSYLDQDAEILEIFVEELEEIFTELDEQFPAWFENASDTETLITIRRHFHTLKGSGRMVGAKSA
GELAWTVEDILNRVMGGSLVLNLPIQKFALTVYKIFQFRLYPDFKNVQEAAIDLRPLVLLGQQLQQNLSPEPALEDLLQL
SETLSAENTLTGLEFADDESVTAKVTDATAADEAETVQEELAEVSEEFPAVQDDIFVQETMSIFLEEAEEHLATIEAFLA
EEQSSKQDYNGLIRALHTLRGSSSMAQIEHIFDASSNVENLFKNLLQDEIVSTSRETALLVQYAEFVGDYLLTLRNGADQ
SRLNTIYQTFNDVWDNYGFSVQSGEHEANPQGLVSRLIELNIDLLLDAEFEFDKRAKVEFPEYIQELSEQAEHLINNTDN
RASEGIHQFTLELKSAYDGVVEKPALLTLDYAYELFAKAHQEFIYLFDTLAAGQRVSLTDDMQKLLNELAAFVQQDIEQF
ESEPAAQSDLSIESAEAEDISVAVQESQPVQAASVESAGLDLAKLSRQLQAAKSQSGAADTNTDFDPDLLDIFLEEAEEL
LAGMDQDLNTWTAEQSNTAALNNLMRYLHTLKGGANMVQATHIGLISHEIETIYERIINQQITVTPGLIGIIRLVQDDIA
DRIQTIRDEQIDYSSAQAVDILKNISELSKGGIASTSEVTEPKVESASEHIDDALAFAVSDQDELPELDDVISVASDIIA
VEPSLSEPELTEPLTAETLIEQPAAEYAEPAQSQKHADLESVRSIVEETFLEEAEELLDSSDLLLAQWFEQRSDRSILLQ
LQRAAHSLKGGARMAEIEPVASIAYELETIFEQFAVHQFNSNAYDPLLQTTLAWLRQAIFEHDYTNFDSLKSNLESIEYV
NVTAQLPDRLTHKDILAPSRTFEFVQGDGTEPPAMMGEWGDTSSRDDSNEMIRISADLVEKMIDLSGENSINRSRIEMDL
GQLGNTLNEMELAIKRLADQLRRMDGELESQILAKHGTDNSRYEDFDPLEMDQYSSLNQLSKSLAESASDLVDFKSTIAE
KIRDAEGLLLQQSRIQAEIQESLMRTRLVPFSRLLPRLQRIVRQTSSTLNRPAELLVQNTEGELDRTILERLVTPFEHML
RNAIDHGIEEDTAQRLEAGKPEVGKIELNITRQGTDVVVTFSDDGKGIDDTRILEKALSQGLIKPDQKVSKEETLQLIFH
PGLSTAKAVTQISGRGVGLDVVQSEIKALGGLVTVDSEIGKGTTFTIRVPTTVAVSDALMVKAGDQQFAIPLAQIERIVR
IAPSTLETYFDGNDDYFKIDNESYKLRYISEFVANQPLPRLHSIAHSLPVLLIKGSTGQSIALLVDQLVGSRGQIVVKPI
GQQFSGIAAIAGATILGDGQVCLILDGQSIARQILATQRTKHASEHRESSRHSNARRLVMIVDDSVTVRKVTSRLLERQG
YDVVTAKDGVDAMEQLENVKPDLMLLDIEMPRMDGFEVTNLVRHHDIHQKLPIIMITSRTGEKHRERAFSLGVTHYMGKP
FQEAELLTNIENLLAAEYEVNG

Nucleotide


Download         Length: 4629 bp        

>NTDB_id=313873 CDG61_RS12815 WP_087549444.1 2607942..2612570(-) (chpA) [Acinetobacter sp. WCHAc010052]
ATGAAAGAAATATTAAAAAATTTAGTTGAAAATACAACTCTTCCCGAAGATAGCTATCTTGATCAGGATGCAGAAATTCT
TGAAATTTTTGTCGAAGAACTGGAAGAAATCTTCACTGAACTGGATGAGCAGTTTCCGGCATGGTTTGAAAATGCCTCCG
ATACTGAAACATTGATCACTATCCGTCGCCACTTTCACACATTGAAAGGTTCTGGGCGTATGGTCGGGGCTAAATCTGCC
GGTGAACTGGCATGGACAGTAGAAGATATACTGAACCGTGTCATGGGGGGATCACTGGTTCTGAATCTTCCGATTCAGAA
ATTTGCTTTAACGGTTTATAAAATTTTTCAGTTCAGACTTTATCCTGATTTTAAAAATGTTCAGGAAGCTGCAATTGATT
TAAGACCATTGGTGTTGTTAGGACAGCAGCTTCAGCAGAATCTCAGTCCTGAACCTGCACTTGAAGATTTACTTCAGTTG
TCTGAAACGCTGTCTGCTGAGAATACGCTGACAGGTCTTGAGTTTGCAGATGATGAGTCGGTTACTGCGAAAGTGACTGA
TGCAACGGCAGCTGATGAAGCTGAAACTGTTCAGGAAGAGCTTGCTGAAGTATCTGAAGAATTCCCTGCTGTTCAGGATG
ACATCTTTGTTCAGGAAACAATGTCTATTTTTCTTGAAGAAGCAGAAGAGCATCTGGCGACGATTGAAGCTTTTCTTGCA
GAAGAGCAGTCATCAAAACAGGACTATAACGGGCTGATCCGTGCTCTGCATACGCTTCGCGGCAGTTCGTCCATGGCACA
GATTGAGCATATTTTTGATGCCAGTTCCAATGTGGAAAATCTGTTTAAAAACCTGTTGCAGGATGAAATCGTATCCACTT
CAAGAGAAACAGCATTACTGGTTCAGTATGCTGAGTTTGTGGGTGATTATCTGCTTACGCTTCGAAATGGAGCTGATCAG
TCAAGACTGAATACGATTTATCAGACATTTAACGATGTGTGGGATAACTACGGTTTCAGTGTTCAGTCTGGAGAACATGA
AGCAAATCCTCAAGGTCTGGTTTCCAGGCTGATTGAACTCAATATTGATCTGCTGCTTGATGCTGAGTTTGAGTTTGATA
AACGTGCCAAAGTTGAATTCCCTGAATATATTCAGGAGTTAAGCGAGCAGGCAGAGCATCTGATTAATAATACAGACAAC
CGTGCATCTGAAGGTATTCATCAGTTCACACTGGAACTGAAGTCTGCTTACGATGGTGTGGTTGAAAAGCCGGCACTTCT
GACTCTTGACTATGCCTATGAGTTGTTTGCAAAGGCACATCAGGAATTTATCTATCTGTTTGATACACTGGCAGCAGGAC
AGCGTGTCAGCCTGACAGATGACATGCAGAAACTTTTGAATGAGCTGGCAGCATTCGTACAGCAGGATATCGAACAGTTT
GAATCCGAGCCAGCTGCTCAGTCTGATCTGAGTATTGAATCTGCTGAAGCTGAAGATATTTCGGTCGCTGTTCAGGAATC
ACAACCAGTACAGGCCGCATCTGTCGAGTCGGCGGGTCTGGATCTTGCAAAACTGTCCCGACAGTTGCAGGCTGCTAAGT
CCCAGTCTGGTGCAGCTGATACCAATACTGATTTTGACCCTGATCTGCTTGATATTTTCCTTGAAGAAGCAGAAGAACTT
CTTGCAGGGATGGATCAGGATCTGAATACATGGACAGCAGAACAGTCCAATACTGCTGCACTGAATAATCTGATGCGTTA
TCTGCATACACTGAAAGGTGGTGCAAATATGGTTCAGGCCACACACATTGGTCTGATTTCACATGAAATAGAAACGATTT
ACGAACGGATTATCAACCAGCAGATTACGGTTACTCCTGGATTGATCGGTATTATCCGGCTTGTTCAGGATGATATCGCT
GACCGTATTCAGACGATTCGTGATGAGCAGATTGATTATTCTTCCGCTCAGGCAGTGGATATACTGAAAAATATTTCAGA
ACTGTCAAAAGGTGGTATTGCATCCACCTCTGAAGTTACAGAGCCGAAAGTTGAATCTGCTTCTGAGCATATTGATGATG
CACTGGCGTTTGCAGTATCCGATCAGGATGAGCTGCCAGAACTGGATGATGTCATCAGTGTTGCGTCAGATATTATTGCG
GTTGAGCCTTCCTTGTCTGAACCTGAGCTGACTGAACCTCTCACTGCTGAAACATTGATTGAACAGCCCGCTGCAGAGTA
CGCTGAACCTGCACAAAGTCAGAAACATGCAGATCTTGAAAGTGTGCGTTCAATTGTGGAAGAAACCTTCCTTGAAGAAG
CAGAAGAACTGCTGGATTCTTCGGATCTGTTACTTGCTCAATGGTTTGAACAGCGTTCAGACCGTAGTATTCTGCTTCAG
TTACAGCGTGCCGCGCACAGCTTGAAGGGCGGTGCCCGTATGGCTGAAATTGAGCCGGTTGCGTCTATTGCTTATGAGCT
GGAAACGATATTTGAGCAGTTTGCTGTACACCAGTTCAACTCAAATGCTTATGATCCGTTGCTTCAGACGACACTGGCAT
GGTTACGTCAGGCGATATTTGAGCATGATTACACCAATTTCGACAGCCTCAAATCCAATCTCGAGTCCATTGAATATGTC
AACGTAACGGCTCAGTTACCAGACAGGCTGACTCACAAAGATATTCTTGCTCCGTCCAGAACCTTTGAGTTTGTTCAGGG
TGACGGTACTGAACCACCTGCAATGATGGGTGAGTGGGGCGATACCTCGAGCCGTGATGACAGTAATGAAATGATCCGTA
TCTCTGCCGACCTGGTTGAGAAGATGATTGACCTGTCAGGTGAAAACTCAATTAACCGTTCACGTATTGAGATGGATCTG
GGGCAGTTGGGTAATACGCTGAATGAAATGGAGCTTGCGATTAAGCGACTGGCGGATCAGCTGCGTCGAATGGATGGTGA
GCTTGAATCACAGATTCTTGCAAAACATGGTACTGACAACTCACGTTATGAAGATTTCGATCCTCTTGAGATGGACCAGT
ATTCATCTTTAAATCAGTTATCCAAATCACTTGCGGAGTCTGCATCGGATCTGGTGGACTTTAAGAGCACGATTGCGGAA
AAAATCCGTGATGCAGAAGGTCTCTTATTACAGCAGTCCCGTATTCAGGCAGAAATTCAGGAAAGTCTGATGCGGACACG
TCTGGTTCCGTTCTCAAGACTGTTGCCCCGTTTACAGCGTATTGTGCGTCAGACCTCATCGACATTGAACCGTCCTGCGG
AACTGCTGGTACAGAATACAGAGGGCGAGCTGGACCGTACTATTCTTGAACGTCTGGTGACTCCATTTGAGCATATGCTT
CGAAATGCGATTGACCACGGTATTGAAGAGGATACTGCACAGCGTCTTGAAGCCGGTAAACCTGAAGTCGGTAAAATTGA
ACTCAATATTACCCGTCAGGGAACCGATGTTGTAGTTACATTCAGTGATGACGGTAAGGGTATTGATGATACCCGTATTC
TTGAAAAAGCACTGAGCCAGGGGCTGATTAAACCTGATCAGAAAGTCAGTAAAGAAGAAACTTTACAGCTGATTTTCCAC
CCTGGTTTAAGTACTGCGAAAGCAGTGACACAGATTTCGGGTCGTGGTGTCGGACTTGATGTCGTGCAAAGCGAAATTAA
AGCCTTAGGCGGTCTGGTAACAGTTGATTCTGAGATTGGTAAAGGAACAACCTTTACCATCCGTGTACCGACAACGGTTG
CGGTCAGTGATGCCCTGATGGTGAAAGCCGGTGATCAGCAGTTTGCTATTCCACTGGCTCAGATTGAACGTATTGTACGG
ATTGCACCATCTACGCTTGAAACTTATTTTGATGGCAATGACGATTATTTCAAAATTGACAACGAATCCTATAAGTTACG
CTACATTTCAGAATTTGTTGCAAATCAGCCATTACCGCGACTGCACAGTATCGCGCATTCATTACCGGTACTGCTGATTA
AAGGCAGTACGGGGCAGAGTATTGCATTACTGGTCGATCAGCTGGTTGGTTCACGTGGTCAGATTGTTGTAAAACCGATT
GGACAACAGTTCTCCGGTATTGCAGCGATTGCAGGTGCAACGATCCTTGGTGATGGTCAGGTCTGTCTGATTCTTGATGG
TCAAAGTATTGCACGTCAGATTCTGGCAACACAGCGTACGAAACATGCGTCTGAACACCGTGAGTCATCACGACACAGTA
ATGCACGTCGTCTGGTGATGATTGTGGATGACTCTGTAACAGTACGTAAGGTAACTTCACGTCTGCTTGAACGTCAGGGT
TATGATGTTGTGACAGCCAAAGATGGTGTGGATGCGATGGAGCAGCTGGAAAATGTCAAACCGGATCTGATGCTGCTTGA
TATTGAAATGCCGCGGATGGATGGTTTTGAAGTGACCAACCTGGTAAGACACCATGATATTCATCAGAAACTGCCAATTA
TCATGATTACATCGCGTACAGGTGAGAAACACCGTGAGCGTGCATTCAGTCTGGGTGTGACTCATTATATGGGTAAACCG
TTCCAGGAAGCAGAATTGCTGACCAATATTGAAAATCTGTTGGCGGCTGAATATGAGGTGAATGGATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

59.587

100

0.599


Multiple sequence alignment