Detailed information NTG0313866

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: CDG61_RS08590
• Genome accession: NZ_CP032143
• Coordinates: 1717712..1718908 (+)
• Length: 398 a.a.
• NCBI ID: WP_087550073.1
• Uniprot ID: -
• Organism: Acinetobacter sp. WCHAc010052
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1712712..1723908

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CDG61_RS08580 (CDG61_08580)	-	1714461..1715666 (-)	1206	WP_087550075.1	aromatic amino acid transaminase	-
CDG61_RS08585 (CDG61_08585)	-	1716414..1717469 (+)	1056	WP_087550074.1	3-deoxy-7-phosphoheptulonate synthase	-
CDG61_RS08590 (CDG61_08590)	pilU	1717712..1718908 (+)	1197	WP_087550073.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
CDG61_RS08595 (CDG61_08595)	-	1718948..1720126 (-)	1179	WP_087550072.1	MFS transporter	-
CDG61_RS08600 (CDG61_08600)	-	1720387..1720716 (+)	330	WP_087550071.1	hypothetical protein	-
CDG61_RS08605 (CDG61_08605)	gcvH	1720788..1721162 (-)	375	WP_087550070.1	glycine cleavage system protein GcvH	-
CDG61_RS08610 (CDG61_08610)	-	1721251..1722282 (-)	1032	WP_087550069.1	AraC family transcriptional regulator	-
CDG61_RS08615 (CDG61_08615)	-	1722427..1722876 (-)	450	WP_087514061.1	MaoC family dehydratase	-

Sequence

Protein

• Length: 398 a.a.
• Molecular weight: 44740.05 Da
• Isoelectric Point: 6.5066

>NTDB_id=313866 CDG61_RS08590 WP_087550073.1 1717712..1718908(+) (pilU) [Acinetobacter sp. WCHAc010052]
MYTSELLEEARRFMFHMLSKVVEYGGSDLFISADFPPSIKHQGLMKPIGQQALTAEKTRLFAYSLMNEKQRAEFETELEC
NFAISVPEVSRFRVNVFQQQLQVGMVIRTITAEIPNFAKLRLPESLKHIIMEKRGLILVVGGTGSGKSTSLAAMIDHRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDCHSWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
ANNANQALDRIINFFPEERKNQLLMDLSSNMKAIISQRLIRTQDGRGRRAAVEILLNTPLIADNILKGQFHALKEIMTKS
RELGMQTFDQALFDLYNDSSISYEEAVRNADSMNELRLQIKLRSTRQDQAVPGSAAVFSVKSEEAETAEDTDSAQSAS

Nucleotide

• Length: 1197 bp

>NTDB_id=313866 CDG61_RS08590 WP_087550073.1 1717712..1718908(+) (pilU) [Acinetobacter sp. WCHAc010052]
ATGTATACCAGTGAATTGTTGGAAGAAGCACGTCGTTTCATGTTTCATATGCTGAGTAAAGTTGTGGAATATGGTGGGTC
AGACCTGTTTATTTCAGCAGATTTTCCACCCAGTATTAAACATCAGGGGCTGATGAAACCGATTGGGCAACAGGCATTAA
CCGCTGAGAAAACCAGACTGTTTGCCTATAGCCTGATGAATGAAAAACAACGGGCAGAGTTTGAAACTGAACTTGAATGT
AACTTTGCTATTTCAGTACCTGAGGTGTCACGGTTCCGGGTCAATGTCTTTCAGCAGCAGTTACAGGTGGGCATGGTCAT
TCGAACCATTACTGCAGAAATCCCAAATTTTGCCAAACTCAGGCTGCCTGAATCCCTAAAGCACATCATTATGGAAAAAC
GTGGTCTGATTCTGGTGGTGGGTGGGACAGGTTCTGGGAAATCTACGTCGCTTGCTGCCATGATCGATCATCGGAATGAA
AACTCAGCAGGACATATTATTACTGTTGAAGATCCAGTCGAATATGTTCATAAACATAAAAAATCCATGATTACGCACCG
TGAAGTCGGGGTCGATTGTCACTCATGGCACAATGCACTGAAAAATACTTTAAGACAGGCACCCGATGTGATTCTGATCG
GAGAAATCCGTGATACAGAAACTATGGAACACGCCATTGCCTTTGCTGAAACAGGACATCTGTGTTTAGGGACTTTACAT
GCCAATAATGCCAATCAGGCTCTGGACCGGATTATTAACTTTTTCCCTGAGGAGCGTAAAAACCAGCTGCTGATGGACTT
ATCCTCAAATATGAAAGCCATTATTTCACAACGGTTGATTCGGACACAGGATGGTCGGGGCAGACGTGCAGCTGTAGAAA
TACTGTTAAATACACCTTTGATAGCAGATAACATTCTGAAAGGGCAGTTTCATGCTCTGAAAGAGATTATGACCAAATCC
CGTGAACTGGGCATGCAAACTTTTGATCAGGCATTATTTGATTTATACAATGATTCTTCAATTTCCTATGAGGAAGCAGT
GCGTAATGCCGACTCAATGAATGAACTGAGGCTTCAAATTAAACTGCGTTCAACCCGACAGGATCAGGCTGTGCCTGGTA
GTGCAGCAGTATTTTCGGTAAAATCTGAAGAAGCTGAAACAGCAGAAGATACAGACTCTGCACAGTCTGCATCATAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (121-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	59.483	87.437	0.52
pilU	Acinetobacter baylyi ADP1	56.484	87.186	0.492
pilU	Vibrio cholerae strain A1552	50.42	89.698	0.452