Detailed information NTG0313826

Bioinformatically predicted

Overview

• Name: crp
• Type: Regulator
• Locus tag: CDG60_RS10955
• Genome accession: NZ_CP032134
• Coordinates: 2096792..2097499 (+)
• Length: 235 a.a.
• NCBI ID: WP_087513889.1
• Uniprot ID: A0A3B7LYD2
• Organism: Acinetobacter chinensis strain WCHAc010005
• Function: regulate competence development (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	2095453..2096585	2096792..2097499	flank	207

Gene organization within MGE regions

Location: 2095453..2097499

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CDG60_RS10950 (CDG60_10950)	-	2095453..2096585 (+)	1133	WP_223155595.1	IS3-like element ISAba14 family transposase	-
CDG60_RS10955 (CDG60_10955)	crp	2096792..2097499 (+)	708	WP_087513889.1	cAMP-activated global transcriptional regulator CRP	Regulator

Sequence

Protein

• Length: 235 a.a.
• Molecular weight: 26590.20 Da
• Isoelectric Point: 4.5573

>NTDB_id=313826 CDG60_RS10955 WP_087513889.1 2096792..2097499(+) (crp) [Acinetobacter chinensis strain WCHAc010005]
MTSNFSQLSTDALSPGQLPESVKALLKRAYINRYPKRTTIVDAGSESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFEANPQRTAEVRTRDVCEIAEITYENFHELSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDVSLEQNEVSEDEFDEED

Nucleotide

• Length: 708 bp

>NTDB_id=313826 CDG60_RS10955 WP_087513889.1 2096792..2097499(+) (crp) [Acinetobacter chinensis strain WCHAc010005]
ATGACTTCAAACTTTTCACAACTAAGCACTGATGCGCTGTCTCCAGGACAGCTGCCAGAGTCAGTTAAAGCATTATTAAA
ACGTGCTTATATCAACCGTTATCCAAAACGTACAACAATTGTTGATGCAGGTTCAGAATCCAAATCGCTGTATCTGATCC
TTAAAGGTTCAGTATCTATTATTCTGCGTGAAGATGATGAACGTGAAATCGTTGTTGCATATTTGAATCCGGGTGATTTT
TTTGGGGAAATGGGTCTTTTCGAAGCGAATCCACAACGTACTGCTGAAGTCCGCACTCGTGACGTTTGTGAAATTGCTGA
AATTACCTATGAAAATTTTCACGAACTCAGCAAGCAATATCCTGACTTAAGCTACGCTGTGTTTGCTCAGCTTGTGCGTC
GTTTAAAAAACACCACACGCAAAGTAACAGACCTTGCATTTATTGACGTATCCGGTCGTATTGCACGCTGTCTGATTGAT
CTGTCTTCTCAACCAGAAGCAATGATTCTCCCTAACGGTCGTCAGATCCGTATTACCCGTCAGGAAATTGGCCGTATTGT
TGGGTGTTCCCGTGAAATGGTTGGCCGCGTTCTCAAGACCCTGGAAGAACAGGGAATGATTGAAACTGATGGTAAAGCTA
TCCTGATTTTTGATGTCTCTTTAGAACAGAATGAAGTTTCTGAAGATGAATTTGATGAAGAAGATTAA

Domains

Predicted by InterproScan.

• Cyclic nucleotide-binding domain (cNMP_binding) (33-120)

• Bacterial regulatory proteins, crp family (Crp) (176-207)

3D structure

• AlphaFold DB: A0A3B7LYD2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
crp	Acinetobacter baumannii D1279779	92.34	100	0.923
crp	Vibrio cholerae strain A1552	47.317	87.234	0.413
crp	Haemophilus influenzae Rd KW20	47.668	82.128	0.391