Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   SEZ_RS06830 Genome accession   NC_011134
Coordinates   1449859..1450860 (-) Length   333 a.a.
NCBI ID   WP_012516008.1    Uniprot ID   A1E373
Organism   Streptococcus equi subsp. zooepidemicus MGCS10565     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1444859..1455860
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SEZ_RS06815 (Sez_1406) - 1445683..1447017 (-) 1335 WP_012516004.1 glycosyltransferase family 4 protein -
  SEZ_RS06820 (Sez_1407) - 1447019..1448017 (-) 999 WP_012516005.1 glycosyltransferase -
  SEZ_RS06825 (Sez_1409) - 1448314..1449789 (-) 1476 WP_041785631.1 alpha-amylase -
  SEZ_RS06830 (Sez_1410) ccpA 1449859..1450860 (-) 1002 WP_012516008.1 catabolite control protein A Regulator
  SEZ_RS06835 (Sez_1411) - 1451034..1452120 (+) 1087 Protein_1320 Xaa-Pro peptidase family protein -
  SEZ_RS06840 (Sez_1414) - 1452488..1453156 (+) 669 WP_012516010.1 nitroreductase family protein -
  SEZ_RS06845 (Sez_1415) - 1453270..1454196 (+) 927 WP_041785915.1 glycosyltransferase family 2 protein -
  SEZ_RS09810 (Sez_1416) - 1454180..1454368 (-) 189 WP_111721717.1 hypothetical protein -
  SEZ_RS06850 (Sez_1417) smpB 1454483..1454950 (-) 468 WP_012516013.1 SsrA-binding protein SmpB -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36631.75 Da        Isoelectric Point: 5.7642

>NTDB_id=31382 SEZ_RS06830 WP_012516008.1 1449859..1450860(-) (ccpA) [Streptococcus equi subsp. zooepidemicus MGCS10565]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTDKIRAEFSRSRTPIVLAGTVDLDHQLPS
VNIDYKAAVADVVDILAKDHQSIAFVSGPLIDDINGKVRLAGYKDGLKKNKLDFKEGLVFEANYSYKEGFELAQRVINSG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=31382 SEZ_RS06830 WP_012516008.1 1449859..1450860(-) (ccpA) [Streptococcus equi subsp. zooepidemicus MGCS10565]
ATGAATACAGATGATACAATCACGATTTATGATGTTGCTCGCGAAGCGGGAGTTTCAATGGCGACAGTTAGTCGAGTTGT
AAATGGTAACAAAAATGTAAAGGAAAATACCCGCAAAAAGGTCTTAGAGGTTATTGATCGTCTCGATTATCGTCCAAATG
CTGTTGCTCGTGGTCTTGCAAGTAAAAAGACAACAACAGTTGGTGTTGTGATTCCTAATATTGCAAATAGCTATTTTTCT
ATCCTGGCAAAGGGAATTGATGATATTGCTGCTATGTACAAGTACAATATCGTTCTTGCTTCAAGCGATGAGGACGACGA
TAAAGAGGTCAATGTTGTGAATACCCTCTTTGCAAAGCAGGTTGATGGCATTATTTTCATGGGACATCACTTGACTGACA
AGATTCGTGCAGAGTTTTCTCGTTCGCGTACGCCAATTGTTCTGGCAGGAACGGTTGATCTGGATCATCAGCTGCCAAGT
GTTAACATTGATTATAAGGCGGCTGTTGCTGATGTTGTGGACATTTTAGCTAAAGACCACCAAAGTATTGCCTTTGTTTC
AGGGCCGCTCATTGATGATATCAATGGAAAGGTGCGTTTGGCTGGCTACAAGGACGGACTCAAGAAGAACAAGCTTGATT
TTAAAGAGGGTCTGGTGTTTGAAGCCAACTATTCCTATAAGGAAGGCTTTGAGCTGGCTCAGCGTGTGATCAATTCCGGA
GCGACAGCTGCCTATGTTGCAGAGGACGAGCTGGCAGCAGGCCTTTTGAATGGTCTTTTTGAAGCTGGTAAGCGTGTTCC
AGAGGACTTTGAGATTATCACAAGCAATGATTCTCCAGTGGTTCAGTACACACGTCCAAATTTGAGCTCTATCAGCCAGC
CAGTCTATGACTTGGGTGCTGTTAGCATGCGTATGCTCACTAAGATCATGAATAAGGAAGAATTAGAAGAAAAAGAAATT
TTATTGAACCATGGCATTAAAAAGCGTGGGACAACAAAATAG

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A1E373

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781
  ccpA Streptococcus pneumoniae D39

76.877

100

0.769
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

54.985

99.399

0.547

Multiple sequence alignment