Detailed information NTG0313811

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: CDG60_RS02010
• Genome accession: NZ_CP032134
• Coordinates: 256691..258061 (-)
• Length: 456 a.a.
• NCBI ID: WP_406565304.1
• Uniprot ID: -
• Organism: Acinetobacter chinensis strain WCHAc010005
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 251691..263061

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CDG60_RS01995 (CDG60_01995)	lptG	252758..253828 (+)	1071	WP_087513570.1	LPS export ABC transporter permease LptG	-
CDG60_RS02000 (CDG60_02000)	gpmI	253943..255490 (+)	1548	WP_087513571.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
CDG60_RS02005 (CDG60_02005)	-	255512..256681 (+)	1170	WP_087513572.1	S41 family peptidase	-
CDG60_RS02010 (CDG60_02010)	pilR	256691..258061 (-)	1371	WP_406565304.1	sigma-54-dependent transcriptional regulator	Regulator
CDG60_RS02015 (CDG60_02015)	pilS	258137..259708 (-)	1572	WP_087513574.1	PAS domain-containing sensor histidine kinase	Regulator
CDG60_RS02020 (CDG60_02020)	-	259733..260368 (-)	636	WP_087513575.1	response regulator	-
CDG60_RS02025 (CDG60_02025)	pbpG	260604..261668 (+)	1065	WP_160116952.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
CDG60_RS02030 (CDG60_02030)	thrC	261762..262901 (-)	1140	WP_087513577.1	threonine synthase	-

Sequence

Protein

• Length: 456 a.a.
• Molecular weight: 51365.02 Da
• Isoelectric Point: 6.6513

>NTDB_id=313811 CDG60_RS02010 WP_406565304.1 256691..258061(-) (pilR) [Acinetobacter chinensis strain WCHAc010005]
MEMTLARMGIKTHIAHRLSEARQLLSEHQYDACLTDLNLPDGNGLELVNLISQHFPQLPVAVLTAYGNMEIAIAALKAGA
FDFVSKPVNQKHLEQLLEKALNKPVEKSSVPESDQLEHRMLIGQSLPIQHLRTTLKKIARSQAPVFITGESGTGKEVVAN
LIHRLSNRCEGPFIAINCGAIPGDLMESELFGHKKGSFTGATQDKQGLIQSAHGGSLFLDEIAELPLSMQVKLLRAVQEK
RIRPIGSEAEIDVDFRVISASHQDLEELVQQGRFRQDLFFRIHVMDLVLPALRERGSDILLLAQHFIHKICKEWDIETKP
LTERARQFLLEQYYPGNVRELRNIIERAITLSDDSQIDLQHLQSAPLRQFSVKPLQSSSETEETAPQTVSEPVVSSTRKL
PEEGLELHLEKVEKEILMNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDSDED

Nucleotide

• Length: 1371 bp

>NTDB_id=313811 CDG60_RS02010 WP_406565304.1 256691..258061(-) (pilR) [Acinetobacter chinensis strain WCHAc010005]
ATGGAAATGACCCTTGCACGCATGGGGATTAAAACACACATCGCACACCGCCTTTCAGAGGCGAGACAACTGCTTTCAGA
ACATCAGTATGATGCATGTCTGACAGACCTGAATCTGCCTGATGGCAATGGTCTGGAGCTCGTCAATCTGATCTCGCAGC
ATTTCCCACAGCTTCCAGTGGCAGTGTTGACTGCTTATGGAAATATGGAAATTGCGATCGCAGCACTGAAAGCCGGTGCC
TTTGATTTTGTCAGTAAACCTGTCAATCAGAAGCACCTGGAACAGTTACTTGAAAAAGCACTGAACAAGCCTGTTGAAAA
AAGCAGTGTCCCTGAATCTGATCAGCTCGAACACCGTATGCTGATTGGTCAGTCACTGCCGATTCAGCATCTGCGTACAA
CACTGAAAAAAATTGCCCGCTCCCAGGCACCTGTGTTTATTACGGGTGAATCCGGTACGGGTAAAGAAGTTGTTGCCAAT
CTGATCCATCGGCTCAGTAACCGCTGTGAAGGCCCTTTTATTGCGATCAACTGCGGTGCGATTCCTGGCGACCTGATGGA
AAGCGAACTGTTTGGCCACAAGAAAGGCAGTTTTACCGGTGCAACCCAGGATAAACAAGGCTTAATCCAGTCTGCACATG
GCGGCAGCCTGTTCCTCGATGAAATTGCTGAACTGCCTTTAAGCATGCAGGTCAAACTGTTACGCGCTGTTCAGGAAAAG
CGGATACGGCCTATTGGCAGTGAAGCAGAAATTGATGTCGATTTCCGGGTGATCAGTGCCAGTCACCAGGATCTGGAAGA
ACTGGTTCAGCAGGGCAGATTCCGTCAGGATTTATTTTTCCGTATTCACGTCATGGATCTGGTACTGCCTGCACTGCGCG
AACGTGGAAGCGATATTTTACTGCTGGCGCAGCACTTCATTCATAAAATCTGTAAAGAATGGGATATTGAAACCAAGCCT
CTGACAGAAAGAGCCCGCCAGTTCCTGCTGGAACAGTACTATCCGGGCAACGTCCGTGAACTTCGCAATATTATTGAACG
TGCCATCACGCTCAGTGATGACAGCCAGATTGATCTTCAGCATTTACAGAGTGCGCCTTTACGTCAGTTCTCGGTAAAAC
CACTGCAAAGCAGCAGTGAAACTGAAGAAACAGCACCTCAGACAGTCAGTGAGCCTGTCGTTTCTTCCACACGGAAGTTA
CCCGAGGAAGGTCTGGAACTTCACCTGGAAAAGGTTGAAAAAGAAATTCTGATGAATGCTTTGAATCTGACCCACTGGAA
CAGAACACTGGCAGCAAAAAAACTGGGAATGTCTTTCCGTTCTTTGCGCTACCGCCTGAAAAAATTTGGACTGGACAGCG
ACGAAGACTGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (121-287)

• Response regulator receiver domain (Response_reg) (4-97)

• Bacterial regulatory protein, Fis family (HTH_8) (409-449)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	72.807	100	0.728
pilR	Pseudomonas aeruginosa PAK	49.119	99.561	0.489