Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   SEZ_RS06760 Genome accession   NC_011134
Coordinates   1432774..1433583 (-) Length   269 a.a.
NCBI ID   WP_012515992.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus MGCS10565     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1427774..1438583
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SEZ_RS06745 (Sez_1391) rnc 1429429..1430121 (-) 693 WP_037581642.1 ribonuclease III -
  SEZ_RS10125 (Sez_1392) - 1430380..1431150 (-) 771 WP_322006259.1 hypothetical protein -
  SEZ_RS10130 (Sez_1393) - 1431196..1431891 (-) 696 WP_338141007.1 helix-turn-helix domain-containing protein -
  SEZ_RS06760 (Sez_1394) vicX 1432774..1433583 (-) 810 WP_012515992.1 MBL fold metallo-hydrolase Regulator
  SEZ_RS06765 (Sez_1395) vicK 1433587..1434939 (-) 1353 WP_012515993.1 cell wall metabolism sensor histidine kinase VicK Regulator
  SEZ_RS06770 (Sez_1396) vicR 1434932..1435642 (-) 711 WP_012515994.1 response regulator YycF Regulator
  SEZ_RS06775 (Sez_1397) - 1435839..1436858 (-) 1020 WP_012515995.1 DUF3114 domain-containing protein -
  SEZ_RS06780 (Sez_1398) - 1436904..1438166 (-) 1263 WP_012515996.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29951.03 Da        Isoelectric Point: 5.7427

>NTDB_id=31379 SEZ_RS06760 WP_012515992.1 1432774..1433583(-) (vicX) [Streptococcus equi subsp. zooepidemicus MGCS10565]
MSEVGFKYSILASGSTGNCFYLETPKRRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGIMARKYNLD
VYANEKTWQMIDERHMIGNLDVAQKHVFERGKTMTFGDIDIESFGVSHDAVDPQFYRIMKDNRSFVMLTDTGYVSDRLAG
IIANADGYLIESNHDVEILRAGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGNKTKKIYLGHLSQENNIKELAHMTMVN
QLAMADLGVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=31379 SEZ_RS06760 WP_012515992.1 1432774..1433583(-) (vicX) [Streptococcus equi subsp. zooepidemicus MGCS10565]
ATGAGTGAGGTTGGCTTTAAATATAGTATTTTAGCATCAGGGTCGACAGGTAACTGCTTTTACTTGGAAACGCCCAAGAG
GCGATTGTTGATTGATGCAGGGCTGACTGGCAAGAAAATCACCAGTCTCCTTGCTGAGATTGATAGAAAGCCTGAGGATT
TAGATGCTATCTTGATTACCCACGAGCATTCCGACCATATCAAGGGCGTTGGAATCATGGCTCGAAAATATAACCTAGAC
GTCTATGCCAATGAAAAGACTTGGCAGATGATTGATGAGCGTCATATGATTGGTAACCTAGACGTAGCACAAAAGCATGT
CTTTGAAAGAGGTAAGACCATGACCTTTGGAGACATTGACATTGAGAGCTTTGGTGTTAGTCATGACGCTGTAGACCCAC
AGTTTTACCGCATTATGAAGGACAACAGGTCCTTTGTCATGCTGACAGATACAGGATATGTGAGTGACCGCTTGGCCGGA
ATCATTGCAAATGCTGATGGCTACTTGATTGAGTCAAATCACGATGTAGAGATATTGCGAGCCGGCTCATACCCTTGGAG
CCTAAAGCAGCGAATCTTATCTGATCTAGGGCATTTATCCAATGAAGATGGTGCTGGTGCTATGATTCGAAGCTTGGGCA
ACAAAACAAAGAAAATCTACCTCGGTCACCTAAGCCAGGAGAACAATATCAAAGAATTAGCCCACATGACAATGGTCAAT
CAGCTAGCAATGGCAGATTTAGGTGTTGGAACAGATTTTACTGTTCATGATACCTCACCAGATACCGCCTGCCCCTTGAC
AGACATCTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

74.349

100

0.743

Multiple sequence alignment