Detailed information NTG0313298

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: Ahae11616_RS07660
• Genome accession: NZ_CP032002
• Coordinates: 1585502..1586221 (+)
• Length: 239 a.a.
• NCBI ID: WP_005080462.1
• Uniprot ID: C0VKX1
• Organism: Acinetobacter haemolyticus strain 11616
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1580502..1591221

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Ahae11616_RS07625 (Ahae11616_07710)	-	1580780..1581763 (+)	984	WP_004639309.1	DNA polymerase III subunit delta'	-
Ahae11616_RS07630 (Ahae11616_07715)	-	1581907..1582215 (+)	309	WP_004639308.1	hypothetical protein	-
Ahae11616_RS07635 (Ahae11616_07720)	-	1582538..1582882 (+)	345	WP_004639306.1	PilZ domain-containing protein	-
Ahae11616_RS07640 (Ahae11616_07725)	-	1582903..1583676 (+)	774	WP_005080456.1	TatD family hydrolase	-
Ahae11616_RS07645 (Ahae11616_07730)	-	1583718..1584323 (+)	606	WP_017394545.1	TetR/AcrR family transcriptional regulator	-
Ahae11616_RS07650 (Ahae11616_07735)	-	1584338..1584949 (+)	612	WP_005080458.1	type II secretion system protein	-
Ahae11616_RS07655 (Ahae11616_07740)	xcpV	1585152..1585496 (+)	345	WP_042110486.1	type II secretion system protein	Machinery gene
Ahae11616_RS07660 (Ahae11616_07745)	xcpW	1585502..1586221 (+)	720	WP_005080462.1	type II secretion system minor pseudopilin GspJ	Machinery gene
Ahae11616_RS07665 (Ahae11616_07750)	gspK	1586223..1587200 (+)	978	WP_004639300.1	type II secretion system minor pseudopilin GspK	-
Ahae11616_RS07670 (Ahae11616_07755)	-	1587286..1587882 (+)	597	WP_017394547.1	6-pyruvoyl trahydropterin synthase family protein	-
Ahae11616_RS07675 (Ahae11616_07760)	ung	1587929..1588642 (+)	714	WP_005090364.1	uracil-DNA glycosylase	-
Ahae11616_RS07680 (Ahae11616_07765)	-	1588639..1589763 (+)	1125	WP_171055793.1	enoyl-CoA hydratase/isomerase family protein	-
Ahae11616_RS07685 (Ahae11616_07770)	tadA	1589768..1590280 (+)	513	WP_005080470.1	tRNA adenosine(34) deaminase TadA	-
Ahae11616_RS07690 (Ahae11616_07775)	-	1590348..1590788 (+)	441	WP_004639295.1	SRPBCC family protein	-

Sequence

Protein

• Length: 239 a.a.
• Molecular weight: 27659.68 Da
• Isoelectric Point: 9.4555

>NTDB_id=313298 Ahae11616_RS07660 WP_005080462.1 1585502..1586221(+) (xcpW) [Acinetobacter haemolyticus strain 11616]
MNNKNNNMQISKFHFVNPRTQSLAFRLAERSSSARLNRSSGFTLVELLVAIAIFAVLSMLGWKVFDYLLKVKDRNAEHEV
SLFALQDAYQQILRDSLQIIPLTANDGRQLQAALVLNDQVFMFSKAGVSDPLKQGLSPYERIEYRFDESQKRLYRLKYTN
LNIPNRVQPMSSVLLDNVERFKVSVFNPQELMQWPENNVDPENTAELRKLPLGLKIQLTVAGTDYEWIYRLIDRSQDSQ

Nucleotide

• Length: 720 bp

>NTDB_id=313298 Ahae11616_RS07660 WP_005080462.1 1585502..1586221(+) (xcpW) [Acinetobacter haemolyticus strain 11616]
ATGAATAATAAAAACAATAATATGCAAATCTCAAAGTTTCACTTTGTTAATCCTCGCACTCAAAGCCTAGCTTTTCGTCT
TGCGGAGCGGTCGAGCAGTGCTCGACTTAATCGCTCCTCAGGATTTACGTTGGTTGAGTTGCTGGTTGCAATTGCAATTT
TTGCAGTTCTTTCTATGTTAGGTTGGAAAGTATTTGATTATTTGTTAAAAGTGAAAGATCGAAATGCTGAACATGAAGTG
AGTTTGTTTGCATTACAAGACGCTTATCAGCAGATCTTGCGAGATAGTTTGCAGATCATCCCTTTAACAGCAAATGATGG
AAGGCAATTGCAAGCTGCATTGGTACTTAATGATCAGGTTTTTATGTTCAGTAAAGCTGGTGTTTCTGATCCGCTCAAGC
AAGGGCTGTCGCCATACGAGCGCATCGAATATCGTTTTGATGAGTCTCAAAAAAGACTATATCGATTGAAATACACAAAT
CTAAATATTCCAAATCGTGTGCAGCCGATGTCAAGTGTATTGTTGGATAATGTTGAGCGCTTTAAAGTATCTGTTTTCAA
TCCACAAGAGTTAATGCAGTGGCCTGAAAATAATGTAGATCCAGAAAACACGGCTGAATTAAGAAAGTTACCATTAGGAT
TGAAAATTCAATTGACTGTTGCTGGTACAGATTATGAGTGGATCTATCGTCTGATCGATCGTAGTCAGGATAGTCAATGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (37-60)

• Type II secretion system (T2SS), protein J (T2SSJ) (94-223)

3D structure

• AlphaFold DB: C0VKX1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	71.564	88.285	0.632