Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | Ahae11616_RS07655 | Genome accession | NZ_CP032002 |
| Coordinates | 1585152..1585496 (+) | Length | 114 a.a. |
| NCBI ID | WP_042110486.1 | Uniprot ID | - |
| Organism | Acinetobacter haemolyticus strain 11616 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1580152..1590496
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Ahae11616_RS07625 (Ahae11616_07710) | - | 1580780..1581763 (+) | 984 | WP_004639309.1 | DNA polymerase III subunit delta' | - |
| Ahae11616_RS07630 (Ahae11616_07715) | - | 1581907..1582215 (+) | 309 | WP_004639308.1 | hypothetical protein | - |
| Ahae11616_RS07635 (Ahae11616_07720) | - | 1582538..1582882 (+) | 345 | WP_004639306.1 | PilZ domain-containing protein | - |
| Ahae11616_RS07640 (Ahae11616_07725) | - | 1582903..1583676 (+) | 774 | WP_005080456.1 | TatD family hydrolase | - |
| Ahae11616_RS07645 (Ahae11616_07730) | - | 1583718..1584323 (+) | 606 | WP_017394545.1 | TetR/AcrR family transcriptional regulator | - |
| Ahae11616_RS07650 (Ahae11616_07735) | - | 1584338..1584949 (+) | 612 | WP_005080458.1 | type II secretion system protein | - |
| Ahae11616_RS07655 (Ahae11616_07740) | xcpV | 1585152..1585496 (+) | 345 | WP_042110486.1 | type II secretion system protein | Machinery gene |
| Ahae11616_RS07660 (Ahae11616_07745) | xcpW | 1585502..1586221 (+) | 720 | WP_005080462.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| Ahae11616_RS07665 (Ahae11616_07750) | gspK | 1586223..1587200 (+) | 978 | WP_004639300.1 | type II secretion system minor pseudopilin GspK | - |
| Ahae11616_RS07670 (Ahae11616_07755) | - | 1587286..1587882 (+) | 597 | WP_017394547.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| Ahae11616_RS07675 (Ahae11616_07760) | ung | 1587929..1588642 (+) | 714 | WP_005090364.1 | uracil-DNA glycosylase | - |
| Ahae11616_RS07680 (Ahae11616_07765) | - | 1588639..1589763 (+) | 1125 | WP_171055793.1 | enoyl-CoA hydratase/isomerase family protein | - |
| Ahae11616_RS07685 (Ahae11616_07770) | tadA | 1589768..1590280 (+) | 513 | WP_005080470.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 114 a.a. Molecular weight: 12655.56 Da Isoelectric Point: 6.4632
>NTDB_id=313297 Ahae11616_RS07655 WP_042110486.1 1585152..1585496(+) (xcpV) [Acinetobacter haemolyticus strain 11616]
MVALAIFAVAAIALTKIAMQYTQATSNAILRTKAQFVAMNEVAMMEINKEWLDGTQSKQITSQGETWQIDKKAQATISPK
VQRIELQVSLFNVDQDKVEAGVGHLVFFNHQTES
MVALAIFAVAAIALTKIAMQYTQATSNAILRTKAQFVAMNEVAMMEINKEWLDGTQSKQITSQGETWQIDKKAQATISPK
VQRIELQVSLFNVDQDKVEAGVGHLVFFNHQTES
Nucleotide
Download Length: 345 bp
>NTDB_id=313297 Ahae11616_RS07655 WP_042110486.1 1585152..1585496(+) (xcpV) [Acinetobacter haemolyticus strain 11616]
ATGGTGGCTTTGGCAATTTTTGCAGTGGCTGCAATCGCGCTAACAAAAATAGCCATGCAATATACGCAAGCAACCTCAAA
TGCAATTTTACGTACTAAGGCTCAATTTGTTGCAATGAATGAGGTTGCAATGATGGAGATTAACAAAGAGTGGTTGGATG
GAACCCAATCCAAACAAATCACTTCACAAGGTGAAACATGGCAAATTGATAAAAAAGCACAAGCAACGATTAGCCCCAAA
GTTCAGCGGATCGAATTACAAGTGAGTTTATTTAACGTTGATCAAGACAAAGTTGAAGCGGGTGTTGGTCATCTAGTGTT
TTTCAATCATCAGACTGAAAGTTAA
ATGGTGGCTTTGGCAATTTTTGCAGTGGCTGCAATCGCGCTAACAAAAATAGCCATGCAATATACGCAAGCAACCTCAAA
TGCAATTTTACGTACTAAGGCTCAATTTGTTGCAATGAATGAGGTTGCAATGATGGAGATTAACAAAGAGTGGTTGGATG
GAACCCAATCCAAACAAATCACTTCACAAGGTGAAACATGGCAAATTGATAAAAAAGCACAAGCAACGATTAGCCCCAAA
GTTCAGCGGATCGAATTACAAGTGAGTTTATTTAACGTTGATCAAGACAAAGTTGAAGCGGGTGTTGGTCATCTAGTGTT
TTTCAATCATCAGACTGAAAGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
80 |
96.491 |
0.772 |