Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA   Type   Machinery gene
Locus tag   AhaeINNSZ174_RS03780 Genome accession   NZ_CP031998
Coordinates   800079..800504 (+) Length   141 a.a.
NCBI ID   WP_005092347.1    Uniprot ID   -
Organism   Acinetobacter haemolyticus strain INNSZ174     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 795079..805504
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AhaeINNSZ174_RS03760 (AhaeINNSZ174_03760) - 796467..796796 (-) 330 WP_228277818.1 hypothetical protein -
  AhaeINNSZ174_RS03765 (AhaeINNSZ174_03765) - 796965..798055 (+) 1091 WP_100222603.1 IS4-like element ISAba33 family transposase -
  AhaeINNSZ174_RS03770 (AhaeINNSZ174_03770) - 798431..799207 (-) 777 WP_005092342.1 SDR family oxidoreductase -
  AhaeINNSZ174_RS03775 (AhaeINNSZ174_03775) mazG 799304..800110 (+) 807 WP_005092344.1 nucleoside triphosphate pyrophosphohydrolase -
  AhaeINNSZ174_RS03780 (AhaeINNSZ174_03780) comEA 800079..800504 (+) 426 WP_005092347.1 ComEA family DNA-binding protein Machinery gene
  AhaeINNSZ174_RS03785 (AhaeINNSZ174_03785) pcnB 800642..802093 (+) 1452 WP_004637952.1 polynucleotide adenylyltransferase PcnB -
  AhaeINNSZ174_RS03790 (AhaeINNSZ174_03790) folK 802090..802578 (+) 489 WP_004637953.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  AhaeINNSZ174_RS03795 (AhaeINNSZ174_03795) panB 802618..803427 (+) 810 WP_004637954.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  AhaeINNSZ174_RS03800 (AhaeINNSZ174_03800) panC 803431..804276 (+) 846 WP_004637955.1 pantoate--beta-alanine ligase -
  AhaeINNSZ174_RS03805 (AhaeINNSZ174_03805) rapZ 804305..805156 (+) 852 WP_004637956.1 RNase adapter RapZ -
  AhaeINNSZ174_RS03810 (AhaeINNSZ174_03810) - 805153..805422 (+) 270 WP_004637957.1 HPr family phosphocarrier protein -

Sequence


Protein


Download         Length: 141 a.a.        Molecular weight: 16196.73 Da        Isoelectric Point: 10.6493

>NTDB_id=313248 AhaeINNSZ174_RS03780 WP_005092347.1 800079..800504(+) (comEA) [Acinetobacter haemolyticus strain INNSZ174]
MKLPQLRSKTNFLLLIILWLGVIPQLNAKQFDQSYIQWKTQQQKHDQQLARQDDQYYLSRPTQQQNVKPVSSSVNISGDK
ISLNQANLQQLQSLSGVGEKKAQAIIEYRQKHGAFKALDELMNVKGIGPKLLEKNRSRLIL

Nucleotide


Download         Length: 426 bp        

>NTDB_id=313248 AhaeINNSZ174_RS03780 WP_005092347.1 800079..800504(+) (comEA) [Acinetobacter haemolyticus strain INNSZ174]
ATGAAATTGCCGCAGTTACGCAGCAAAACTAACTTTTTATTATTGATTATTTTATGGTTGGGGGTAATTCCCCAGCTCAA
TGCTAAACAGTTTGATCAATCCTATATACAATGGAAAACACAGCAACAAAAACATGATCAGCAATTGGCTAGACAAGATG
ACCAATATTATTTATCTAGACCGACCCAGCAACAAAATGTGAAACCTGTTTCATCTTCTGTAAATATTTCAGGCGATAAA
ATTAGCTTAAATCAAGCGAACTTACAGCAGTTGCAAAGTTTAAGTGGTGTAGGTGAGAAAAAAGCCCAAGCGATTATTGA
ATATCGACAAAAACATGGTGCATTTAAAGCATTAGATGAACTCATGAATGTCAAAGGAATTGGGCCGAAACTGCTTGAAA
AGAATAGGTCGAGACTTATTTTATAG

Domains


Predicted by InterproScan.

(79-139)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

50.37

95.745

0.482

  comEA Acinetobacter baumannii D1279779

48.507

95.035

0.461

  comEA Acinetobacter baylyi ADP1

44.118

96.454

0.426


Multiple sequence alignment