Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | Ahae5227_RS01635 | Genome accession | NZ_CP031988 |
| Coordinates | 355438..355935 (+) | Length | 165 a.a. |
| NCBI ID | WP_004641267.1 | Uniprot ID | N9FBJ9 |
| Organism | Acinetobacter haemolyticus strain 5227 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 350438..360935
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Ahae5227_RS01625 (Ahae5227_01645) | - | 350613..351401 (+) | 789 | WP_005086993.1 | hypothetical protein | - |
| Ahae5227_RS01630 (Ahae5227_01650) | - | 351418..355428 (+) | 4011 | WP_008941158.1 | pilus assembly protein | - |
| Ahae5227_RS01635 (Ahae5227_01655) | comE | 355438..355935 (+) | 498 | WP_004641267.1 | type IV pilin protein | Machinery gene |
| Ahae5227_RS01640 (Ahae5227_01660) | - | 355929..356387 (+) | 459 | WP_004641266.1 | type IV pilin protein | - |
| Ahae5227_RS01645 (Ahae5227_01665) | - | 356662..357258 (+) | 597 | WP_115736348.1 | Tfp pilus assembly protein FimT/FimU | - |
| Ahae5227_RS01650 (Ahae5227_01670) | pilV | 357255..357743 (+) | 489 | WP_004641261.1 | type IV pilus modification protein PilV | Machinery gene |
| Ahae5227_RS01655 (Ahae5227_01675) | - | 357745..358875 (+) | 1131 | WP_080591904.1 | PilW family protein | - |
| Ahae5227_RS01660 (Ahae5227_01680) | pilX | 358878..359612 (+) | 735 | WP_004641259.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 165 a.a. Molecular weight: 17952.36 Da Isoelectric Point: 8.4798
>NTDB_id=313160 Ahae5227_RS01635 WP_004641267.1 355438..355935(+) (comE) [Acinetobacter haemolyticus strain 5227]
MQNNRLTSAQGFTLVELMIVVVIVAIFAAIAIPSYQEYVRRAIAAQAQQEMQRISTELERSKARNFNYLGFPSTVVLPVG
ATGAAIQYTITVSDGADVSRSLTDSAATGQSWVMRGIWKTAETTNVDNFSFLMTSSGVRCKNKTKANITATNVDNATCGT
GREEW
MQNNRLTSAQGFTLVELMIVVVIVAIFAAIAIPSYQEYVRRAIAAQAQQEMQRISTELERSKARNFNYLGFPSTVVLPVG
ATGAAIQYTITVSDGADVSRSLTDSAATGQSWVMRGIWKTAETTNVDNFSFLMTSSGVRCKNKTKANITATNVDNATCGT
GREEW
Nucleotide
Download Length: 498 bp
>NTDB_id=313160 Ahae5227_RS01635 WP_004641267.1 355438..355935(+) (comE) [Acinetobacter haemolyticus strain 5227]
ATGCAAAATAATCGGTTAACCTCTGCTCAAGGGTTTACTTTGGTTGAACTAATGATTGTTGTCGTTATTGTTGCAATTTT
TGCAGCAATAGCGATACCAAGTTATCAAGAATATGTTCGGCGTGCGATTGCTGCGCAAGCTCAGCAGGAAATGCAACGCA
TATCAACTGAACTGGAAAGAAGTAAAGCTAGAAACTTCAATTATTTGGGGTTTCCGAGTACGGTTGTTTTGCCCGTTGGT
GCAACAGGTGCTGCGATTCAATATACGATTACTGTTAGTGACGGAGCAGATGTGAGTAGATCACTAACAGATAGTGCAGC
AACAGGACAAAGCTGGGTCATGCGCGGTATTTGGAAAACAGCCGAAACAACAAATGTGGATAACTTTAGTTTTTTGATGA
CCAGTTCAGGAGTCCGCTGTAAAAATAAAACCAAGGCAAACATTACAGCAACGAATGTCGATAATGCGACATGTGGTACA
GGGCGAGAAGAATGGTAA
ATGCAAAATAATCGGTTAACCTCTGCTCAAGGGTTTACTTTGGTTGAACTAATGATTGTTGTCGTTATTGTTGCAATTTT
TGCAGCAATAGCGATACCAAGTTATCAAGAATATGTTCGGCGTGCGATTGCTGCGCAAGCTCAGCAGGAAATGCAACGCA
TATCAACTGAACTGGAAAGAAGTAAAGCTAGAAACTTCAATTATTTGGGGTTTCCGAGTACGGTTGTTTTGCCCGTTGGT
GCAACAGGTGCTGCGATTCAATATACGATTACTGTTAGTGACGGAGCAGATGTGAGTAGATCACTAACAGATAGTGCAGC
AACAGGACAAAGCTGGGTCATGCGCGGTATTTGGAAAACAGCCGAAACAACAAATGTGGATAACTTTAGTTTTTTGATGA
CCAGTTCAGGAGTCCGCTGTAAAAATAAAACCAAGGCAAACATTACAGCAACGAATGTCGATAATGCGACATGTGGTACA
GGGCGAGAAGAATGGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Acinetobacter baylyi ADP1 |
43.243 |
100 |
0.485 |
| pilY2 | Acinetobacter baumannii D1279779 |
45.455 |
100 |
0.455 |