Detailed information    

insolico Bioinformatically predicted

Overview


Name   crp   Type   Regulator
Locus tag   AhaeAN3_RS06130 Genome accession   NZ_CP031984
Coordinates   1270493..1271200 (-) Length   235 a.a.
NCBI ID   WP_005082645.1    Uniprot ID   A0A5P1UT60
Organism   Acinetobacter haemolyticus strain AN3     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1265493..1276200
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AhaeAN3_RS06115 (AhaeAN3_06165) - 1266151..1267743 (+) 1593 WP_160127000.1 urea amidolyase family protein -
  AhaeAN3_RS06120 (AhaeAN3_06170) - 1267727..1269457 (+) 1731 WP_160127001.1 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha -
  AhaeAN3_RS06125 (AhaeAN3_06175) - 1269513..1270292 (-) 780 WP_005090033.1 M48 family metallopeptidase -
  AhaeAN3_RS06130 (AhaeAN3_06180) crp 1270493..1271200 (-) 708 WP_005082645.1 cAMP-activated global transcriptional regulator CRP Regulator
  AhaeAN3_RS06135 (AhaeAN3_06185) - 1271347..1271769 (+) 423 WP_004639481.1 OsmC family protein -
  AhaeAN3_RS06140 (AhaeAN3_06190) - 1271834..1272634 (-) 801 WP_161401299.1 peptidoglycan DD-metalloendopeptidase family protein -
  AhaeAN3_RS06145 (AhaeAN3_06195) clpB 1272898..1275477 (+) 2580 WP_160127003.1 ATP-dependent chaperone ClpB -
  AhaeAN3_RS06150 (AhaeAN3_06200) - 1275647..1276072 (+) 426 WP_004639475.1 hypothetical protein -

Sequence


Protein


Download         Length: 235 a.a.        Molecular weight: 26618.22 Da        Isoelectric Point: 4.8321

>NTDB_id=313132 AhaeAN3_RS06130 WP_005082645.1 1270493..1271200(-) (crp) [Acinetobacter haemolyticus strain AN3]
MTSNFSHLSTDALSPGQLPESVKALLKRAHINRYPKRTTIVDAGTESRSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFEKNPQRTAEVRTRDVCEIAEISYDNFHELSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSAQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEDQGMIQTDGKAILIFDASLEENTFPEDEYDDED

Nucleotide


Download         Length: 708 bp        

>NTDB_id=313132 AhaeAN3_RS06130 WP_005082645.1 1270493..1271200(-) (crp) [Acinetobacter haemolyticus strain AN3]
ATGACTTCAAATTTTTCACATCTTAGCACTGATGCTTTGTCTCCAGGCCAACTACCTGAATCAGTAAAAGCTTTGCTAAA
ACGTGCTCATATTAACAGATACCCTAAACGCACCACGATTGTTGACGCTGGAACGGAATCAAGATCACTGTATTTAATTT
TAAAAGGTTCAGTATCAATTATTTTACGTGAAGATGATGAACGTGAAATCGTTGTTGCTTATTTGAATCCTGGGGACTTC
TTTGGTGAGATGGGTCTTTTTGAAAAGAACCCTCAACGTACTGCTGAAGTACGCACTCGAGATGTATGCGAAATTGCAGA
GATTTCTTATGACAATTTCCATGAATTAAGTAAACAGTATCCTGATTTAAGTTACGCAGTATTTGCTCAACTGGTGCGTC
GTCTTAAAAACACAACTCGTAAAGTAACTGACCTTGCCTTTATCGACGTTTCAGGTCGTATTGCACGTTGCTTAATCGAC
TTATCTGCTCAACCAGAGGCAATGATTTTACCGAATGGTCGTCAGATTCGTATCACTCGTCAAGAGATTGGTCGTATTGT
CGGTTGCTCTCGTGAAATGGTTGGTCGTGTCCTCAAAACACTTGAAGACCAAGGCATGATCCAAACTGATGGTAAAGCAA
TTTTAATTTTTGATGCGTCTTTAGAGGAAAATACCTTTCCTGAAGATGAATATGATGATGAAGATTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5P1UT60

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

93.617

100

0.936

  crp Vibrio cholerae strain A1552

47.573

87.66

0.417

  crp Haemophilus influenzae Rd KW20

49.231

82.979

0.409


Multiple sequence alignment