Detailed information    

insolico Bioinformatically predicted

Overview

Name   comE   Type   Machinery gene
Locus tag   AhaeAN3_RS01575 Genome accession   NZ_CP031984
Coordinates   332150..332629 (+) Length   159 a.a.
NCBI ID   WP_026057290.1    Uniprot ID   -
Organism   Acinetobacter haemolyticus strain AN3     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 327150..337629
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AhaeAN3_RS01540 (AhaeAN3_01570) - 327178..327636 (+) 459 WP_004641266.1 type IV pilin protein -
  AhaeAN3_RS01545 (AhaeAN3_01575) - 327911..328507 (+) 597 WP_115736348.1 Tfp pilus assembly protein FimT/FimU -
  AhaeAN3_RS01550 (AhaeAN3_01580) pilV 328504..328992 (+) 489 WP_160126844.1 type IV pilus modification protein PilV Machinery gene
  AhaeAN3_RS01555 (AhaeAN3_01585) comB 329177..330124 (+) 948 WP_252716628.1 PilW family protein Machinery gene
  AhaeAN3_RS01560 (AhaeAN3_01590) pilX 330127..330861 (+) 735 WP_004641259.1 PilX N-terminal domain-containing pilus assembly protein Machinery gene
  AhaeAN3_RS01565 (AhaeAN3_01595) - 330875..331141 (+) 267 WP_160126845.1 hypothetical protein -
  AhaeAN3_RS01570 (AhaeAN3_01600) - 331120..332166 (+) 1047 Protein_302 pilus assembly protein PilY -
  AhaeAN3_RS01575 (AhaeAN3_01605) comE 332150..332629 (+) 480 WP_026057290.1 type IV pilin protein Machinery gene
  AhaeAN3_RS01580 (AhaeAN3_01610) rpsP 332795..333052 (+) 258 WP_004641253.1 30S ribosomal protein S16 -
  AhaeAN3_RS01585 (AhaeAN3_01615) rimM 333071..333619 (+) 549 WP_004641251.1 ribosome maturation factor RimM -
  AhaeAN3_RS01590 (AhaeAN3_01620) trmD 333665..334405 (+) 741 WP_004641249.1 tRNA (guanosine(37)-N1)-methyltransferase TrmD -
  AhaeAN3_RS01595 (AhaeAN3_01625) rplS 334540..334911 (+) 372 WP_004641247.1 50S ribosomal protein L19 -
  AhaeAN3_RS01600 (AhaeAN3_01630) - 334974..335948 (-) 975 WP_160126846.1 esterase/lipase family protein -
  AhaeAN3_RS01605 (AhaeAN3_01635) - 336053..337099 (-) 1047 WP_160126847.1 lipase secretion chaperone -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 17811.63 Da        Isoelectric Point: 9.4060

>NTDB_id=313122 AhaeAN3_RS01575 WP_026057290.1 332150..332629(+) (comE) [Acinetobacter haemolyticus strain AN3]
MKVMNRRSGFTLIELMITVAIIAILAVIAIPSYDIYIRKADLSTAQQEMHKIAALLEQHRTRNFSYEGFILRDPVRNEGP
YADVDNATKTMLLLPLNASSGKQKFTLILTVDSQTWSLKAESQNPRNYSLLMTSTGLKCKTKTPANITNQSCGLASEEW

Nucleotide


Download         Length: 480 bp        

>NTDB_id=313122 AhaeAN3_RS01575 WP_026057290.1 332150..332629(+) (comE) [Acinetobacter haemolyticus strain AN3]
ATGAAAGTAATGAATAGGCGATCTGGATTTACTCTGATTGAGCTGATGATCACAGTGGCGATCATTGCTATCCTAGCAGT
GATCGCCATCCCGAGTTATGACATTTATATTCGTAAAGCAGACTTATCAACAGCTCAACAAGAGATGCATAAAATTGCTG
CATTATTAGAACAACATCGAACGCGTAACTTCAGTTATGAGGGATTTATATTAAGAGATCCTGTGCGCAATGAAGGACCC
TATGCAGATGTGGATAATGCAACCAAAACCATGTTGCTTTTACCTTTAAATGCATCGAGTGGTAAGCAAAAATTTACCTT
GATTTTAACGGTTGATTCACAGACTTGGTCACTTAAGGCTGAAAGCCAAAATCCACGTAATTACTCCTTACTTATGACCA
GCACTGGTCTAAAATGTAAGACCAAAACACCTGCCAATATCACCAATCAAAGTTGTGGTTTAGCTTCAGAAGAGTGGTAA

Domains

Predicted by InterproScan.

Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS)

(31-126)

Prokaryotic N-terminal methylation motif (N_methyl)

(4-29)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE Acinetobacter baylyi ADP1

45.93

100

0.497

Multiple sequence alignment