Detailed information
Bioinformatically predicted
Overview
| Name | comB | Type | Machinery gene |
| Locus tag | AhaeAN3_RS01555 | Genome accession | NZ_CP031984 |
| Coordinates | 329177..330124 (+) | Length | 315 a.a. |
| NCBI ID | WP_252716628.1 | Uniprot ID | - |
| Organism | Acinetobacter haemolyticus strain AN3 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 324177..335124
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AhaeAN3_RS01535 (AhaeAN3_01565) | comE | 326687..327184 (+) | 498 | WP_004641267.1 | type IV pilin protein | Machinery gene |
| AhaeAN3_RS01540 (AhaeAN3_01570) | - | 327178..327636 (+) | 459 | WP_004641266.1 | type IV pilin protein | - |
| AhaeAN3_RS01545 (AhaeAN3_01575) | - | 327911..328507 (+) | 597 | WP_115736348.1 | Tfp pilus assembly protein FimT/FimU | - |
| AhaeAN3_RS01550 (AhaeAN3_01580) | pilV | 328504..328992 (+) | 489 | WP_160126844.1 | type IV pilus modification protein PilV | Machinery gene |
| AhaeAN3_RS01555 (AhaeAN3_01585) | comB | 329177..330124 (+) | 948 | WP_252716628.1 | PilW family protein | Machinery gene |
| AhaeAN3_RS01560 (AhaeAN3_01590) | pilX | 330127..330861 (+) | 735 | WP_004641259.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| AhaeAN3_RS01565 (AhaeAN3_01595) | - | 330875..331141 (+) | 267 | WP_160126845.1 | hypothetical protein | - |
| AhaeAN3_RS01570 (AhaeAN3_01600) | - | 331120..332166 (+) | 1047 | Protein_302 | pilus assembly protein PilY | - |
| AhaeAN3_RS01575 (AhaeAN3_01605) | comE | 332150..332629 (+) | 480 | WP_026057290.1 | type IV pilin protein | Machinery gene |
| AhaeAN3_RS01580 (AhaeAN3_01610) | rpsP | 332795..333052 (+) | 258 | WP_004641253.1 | 30S ribosomal protein S16 | - |
| AhaeAN3_RS01585 (AhaeAN3_01615) | rimM | 333071..333619 (+) | 549 | WP_004641251.1 | ribosome maturation factor RimM | - |
| AhaeAN3_RS01590 (AhaeAN3_01620) | trmD | 333665..334405 (+) | 741 | WP_004641249.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| AhaeAN3_RS01595 (AhaeAN3_01625) | rplS | 334540..334911 (+) | 372 | WP_004641247.1 | 50S ribosomal protein L19 | - |
Sequence
Protein
Download Length: 315 a.a. Molecular weight: 34003.50 Da Isoelectric Point: 7.2177
>NTDB_id=313120 AhaeAN3_RS01555 WP_252716628.1 329177..330124(+) (comB) [Acinetobacter haemolyticus strain AN3]
MVSLALGLIIVAAATQLFITGLTSYKLQKAMAHIQDSASFGLNFIVDDIRKANLSSPMPAVNDQIAYSGIILTSKNVGSK
INLNCTACFSDNKLTSFGNANVTGLANDQLLIRYRSPQDGFDCSGNTIATDTFVVQRYFVGSTSTDLRQSLRCQAAQYTQ
AQLDAATEANPLLLSWSASQVILPNVDFFQVRLGYIDGELESANSSLAYTDIKNYMALSAKTKNIDGVVQTVRPHVHAVQ
IGVLVQSADSAGHQSIIKDRNKQPFQVLGTQVTLTPTYQDTRLRQVVDQTISLRNAMGWVTEGCDSSKTTCTGGA
MVSLALGLIIVAAATQLFITGLTSYKLQKAMAHIQDSASFGLNFIVDDIRKANLSSPMPAVNDQIAYSGIILTSKNVGSK
INLNCTACFSDNKLTSFGNANVTGLANDQLLIRYRSPQDGFDCSGNTIATDTFVVQRYFVGSTSTDLRQSLRCQAAQYTQ
AQLDAATEANPLLLSWSASQVILPNVDFFQVRLGYIDGELESANSSLAYTDIKNYMALSAKTKNIDGVVQTVRPHVHAVQ
IGVLVQSADSAGHQSIIKDRNKQPFQVLGTQVTLTPTYQDTRLRQVVDQTISLRNAMGWVTEGCDSSKTTCTGGA
Nucleotide
Download Length: 948 bp
>NTDB_id=313120 AhaeAN3_RS01555 WP_252716628.1 329177..330124(+) (comB) [Acinetobacter haemolyticus strain AN3]
ATGGTCTCTTTGGCTCTAGGCTTAATTATTGTCGCTGCAGCAACACAATTATTTATTACTGGCCTGACCAGTTATAAGCT
ACAAAAGGCGATGGCACATATTCAGGATAGCGCAAGTTTCGGATTAAACTTCATCGTTGATGATATTCGTAAAGCAAATT
TGAGCTCGCCGATGCCAGCGGTCAATGATCAAATTGCTTATTCAGGAATCATTCTAACCTCAAAGAATGTTGGATCAAAA
ATTAATTTAAATTGCACGGCATGCTTTTCTGATAACAAATTAACCAGCTTTGGAAATGCCAATGTTACAGGTTTAGCTAA
TGATCAGTTGTTAATTCGTTATCGATCTCCACAAGATGGTTTCGATTGTTCTGGAAATACTATAGCAACTGATACATTTG
TTGTTCAGCGTTATTTTGTTGGTTCAACATCAACTGATTTACGTCAATCTCTGCGTTGTCAAGCTGCTCAATATACACAA
GCACAATTAGATGCTGCCACTGAAGCAAATCCTCTGCTATTAAGTTGGTCAGCAAGTCAGGTGATTTTACCAAATGTAGA
CTTTTTTCAAGTTCGTCTAGGTTATATCGATGGTGAGCTTGAGAGCGCAAATAGCTCACTTGCTTATACTGATATAAAAA
ATTATATGGCTTTGAGTGCTAAAACCAAGAATATAGATGGCGTTGTTCAAACTGTACGCCCACATGTGCATGCTGTTCAA
ATAGGTGTATTGGTCCAATCTGCCGATTCTGCGGGGCATCAATCTATTATCAAAGATCGGAATAAACAGCCATTTCAGGT
ACTTGGTACTCAGGTAACGTTAACACCAACCTATCAAGATACTCGATTACGTCAGGTTGTAGATCAAACAATATCACTTC
GTAATGCAATGGGTTGGGTAACTGAAGGGTGTGATAGCAGTAAAACGACTTGTACGGGAGGGGCTTGA
ATGGTCTCTTTGGCTCTAGGCTTAATTATTGTCGCTGCAGCAACACAATTATTTATTACTGGCCTGACCAGTTATAAGCT
ACAAAAGGCGATGGCACATATTCAGGATAGCGCAAGTTTCGGATTAAACTTCATCGTTGATGATATTCGTAAAGCAAATT
TGAGCTCGCCGATGCCAGCGGTCAATGATCAAATTGCTTATTCAGGAATCATTCTAACCTCAAAGAATGTTGGATCAAAA
ATTAATTTAAATTGCACGGCATGCTTTTCTGATAACAAATTAACCAGCTTTGGAAATGCCAATGTTACAGGTTTAGCTAA
TGATCAGTTGTTAATTCGTTATCGATCTCCACAAGATGGTTTCGATTGTTCTGGAAATACTATAGCAACTGATACATTTG
TTGTTCAGCGTTATTTTGTTGGTTCAACATCAACTGATTTACGTCAATCTCTGCGTTGTCAAGCTGCTCAATATACACAA
GCACAATTAGATGCTGCCACTGAAGCAAATCCTCTGCTATTAAGTTGGTCAGCAAGTCAGGTGATTTTACCAAATGTAGA
CTTTTTTCAAGTTCGTCTAGGTTATATCGATGGTGAGCTTGAGAGCGCAAATAGCTCACTTGCTTATACTGATATAAAAA
ATTATATGGCTTTGAGTGCTAAAACCAAGAATATAGATGGCGTTGTTCAAACTGTACGCCCACATGTGCATGCTGTTCAA
ATAGGTGTATTGGTCCAATCTGCCGATTCTGCGGGGCATCAATCTATTATCAAAGATCGGAATAAACAGCCATTTCAGGT
ACTTGGTACTCAGGTAACGTTAACACCAACCTATCAAGATACTCGATTACGTCAGGTTGTAGATCAAACAATATCACTTC
GTAATGCAATGGGTTGGGTAACTGAAGGGTGTGATAGCAGTAAAACGACTTGTACGGGAGGGGCTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB | Acinetobacter baylyi ADP1 |
49.201 |
99.365 |
0.489 |