Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   AhaeAN59_RS15895 Genome accession   NZ_CP031972
Coordinates   3350412..3351542 (+) Length   376 a.a.
NCBI ID   WP_005092485.1    Uniprot ID   A0A845PGR0
Organism   Acinetobacter haemolyticus strain AN59     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3345412..3356542
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AhaeAN59_RS15875 (AhaeAN59_16050) - 3345965..3348061 (-) 2097 WP_005092480.1 TonB-dependent copper receptor -
  AhaeAN59_RS15880 (AhaeAN59_16055) - 3348135..3348572 (-) 438 WP_005092481.1 DUF2946 family protein -
  AhaeAN59_RS15885 (AhaeAN59_16060) def 3348593..3349123 (-) 531 WP_004637502.1 peptide deformylase -
  AhaeAN59_RS15890 (AhaeAN59_16065) tsaP 3349249..3350400 (+) 1152 WP_005092484.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  AhaeAN59_RS15895 (AhaeAN59_16070) dprA 3350412..3351542 (+) 1131 WP_005092485.1 DNA-processing protein DprA Machinery gene
  AhaeAN59_RS15900 (AhaeAN59_16075) - 3351580..3352149 (+) 570 WP_004637499.1 Sua5/YciO/YrdC/YwlC family protein -
  AhaeAN59_RS15905 (AhaeAN59_16080) - 3352525..3353445 (-) 921 WP_005092487.1 DMT family transporter -
  AhaeAN59_RS15910 (AhaeAN59_16085) - 3353548..3354195 (-) 648 WP_017396658.1 TetR/AcrR family transcriptional regulator -
  AhaeAN59_RS15915 (AhaeAN59_16090) - 3354342..3355565 (+) 1224 WP_005085676.1 MFS transporter -
  AhaeAN59_RS15920 (AhaeAN59_16095) - 3355577..3356350 (+) 774 WP_005092489.1 helix-turn-helix transcriptional regulator -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 41886.57 Da        Isoelectric Point: 6.6958

>NTDB_id=313028 AhaeAN59_RS15895 WP_005092485.1 3350412..3351542(+) (dprA) [Acinetobacter haemolyticus strain AN59]
MLNQLLPHHYSTVLVWYLVQHSLSSFQKIVDYFGNCEQATQTERFPEWQQLGLHANHLKRLAEFQTPEGQQQFAQLVKLI
CQHSDFILTPQDIGYPTQLLPYSDHPPILFGQGNPHALLQPQIAMVGSRKPSPHGRQVAYDFAYYLSEKGFYISSGLAHG
IDHAAHQGGLVHQRTIAVVGTGLDRVYPAQHVQLAQQIAQSGAIISEFLPSTMPLQQHFPRRNRIVSGLSLGVVVVEAAI
KSGSLITANQAASQGKMVFAIPGHIYSEHHQGCHQLIREGAILVDHPEQVIEDLALPTQWQSEQQSSEKSSNAAPNLPSH
LVGLYQCLDWVGQDIDQLTQQQQSNIAELTSQLMELELLGLCTQQGGRYLRCRPML

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=313028 AhaeAN59_RS15895 WP_005092485.1 3350412..3351542(+) (dprA) [Acinetobacter haemolyticus strain AN59]
ATGTTGAACCAATTATTACCTCACCATTACTCTACCGTGCTGGTGTGGTATTTGGTTCAACATTCACTTTCTAGCTTTCA
AAAAATTGTCGACTATTTTGGCAATTGCGAACAAGCAACCCAAACTGAGCGCTTCCCTGAATGGCAACAACTGGGTTTAC
ATGCCAATCATTTAAAACGTTTAGCTGAATTTCAAACACCTGAAGGGCAACAACAATTTGCTCAGTTAGTAAAATTAATC
TGTCAACATAGTGATTTTATTTTAACACCCCAAGATATTGGCTATCCGACACAACTGCTCCCTTACTCAGACCATCCACC
GATACTTTTTGGACAAGGGAATCCACACGCTTTATTACAACCACAAATCGCGATGGTAGGAAGCCGCAAACCGAGTCCTC
ATGGGCGCCAAGTCGCTTATGATTTTGCGTATTATTTAAGTGAAAAAGGTTTTTATATTAGTAGTGGTCTAGCCCATGGT
ATTGATCATGCTGCACATCAAGGTGGATTGGTTCATCAACGTACCATTGCTGTTGTTGGAACAGGATTAGACCGTGTCTA
TCCAGCTCAACATGTACAACTAGCCCAGCAAATTGCACAGTCGGGTGCTATCATCTCCGAGTTCCTTCCCTCCACTATGC
CTTTACAACAACATTTCCCTCGTCGAAATCGTATCGTCAGTGGTTTAAGTCTTGGTGTAGTTGTAGTTGAAGCTGCAATA
AAAAGTGGTTCTCTTATTACTGCCAATCAGGCGGCTAGCCAAGGAAAAATGGTGTTTGCGATTCCTGGGCATATCTATAG
TGAACATCATCAAGGCTGTCACCAACTCATTCGAGAAGGTGCAATCTTAGTCGATCATCCTGAGCAAGTAATCGAGGACT
TAGCCTTACCTACTCAATGGCAATCTGAACAGCAATCTTCAGAAAAATCCTCAAATGCGGCCCCAAACCTTCCCTCACAC
TTGGTTGGTCTATATCAATGTTTAGACTGGGTTGGACAAGACATAGACCAACTCACACAACAACAGCAAAGCAATATTGC
TGAGCTTACTTCACAACTCATGGAACTTGAGCTATTAGGTTTATGTACACAACAAGGCGGACGCTATTTACGTTGTCGTC
CAATGCTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A845PGR0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

72.8

99.734

0.726

  dprA Acinetobacter baumannii D1279779

72.8

99.734

0.726

  dprA Acinetobacter baylyi ADP1

67.895

100

0.686

  dprA Vibrio campbellii strain DS40M4

41.896

86.968

0.364


Multiple sequence alignment