Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA/comEC   Type   Machinery gene
Locus tag   AhaeAN59_RS04990 Genome accession   NZ_CP031972
Coordinates   1056600..1059038 (+) Length   812 a.a.
NCBI ID   WP_160126531.1    Uniprot ID   A0A857II28
Organism   Acinetobacter haemolyticus strain AN59     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Prophage 1051280..1063832 1056600..1059038 within 0


Gene organization within MGE regions


Location: 1051280..1063832
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AhaeAN59_RS17620 - 1051280..1051423 (-) 144 WP_004757630.1 hypothetical protein -
  AhaeAN59_RS04960 (AhaeAN59_05025) - 1051459..1052397 (-) 939 WP_160126529.1 hypothetical protein -
  AhaeAN59_RS04965 (AhaeAN59_05030) - 1052606..1053076 (+) 471 WP_004640146.1 YaiI/YqxD family protein -
  AhaeAN59_RS04970 (AhaeAN59_05035) - 1053084..1053977 (+) 894 WP_017395187.1 DMT family transporter -
  AhaeAN59_RS04975 (AhaeAN59_05040) - 1053992..1054576 (-) 585 WP_004640143.1 PilZ domain-containing protein -
  AhaeAN59_RS04980 (AhaeAN59_05045) - 1054602..1055837 (+) 1236 WP_160126530.1 lipoprotein-releasing ABC transporter permease subunit -
  AhaeAN59_RS04985 (AhaeAN59_05050) lolD 1055830..1056516 (+) 687 WP_075315118.1 lipoprotein-releasing ABC transporter ATP-binding protein LolD -
  AhaeAN59_RS04990 (AhaeAN59_05055) comA/comEC 1056600..1059038 (+) 2439 WP_160126531.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  AhaeAN59_RS04995 (AhaeAN59_05060) - 1059027..1059983 (-) 957 WP_160126532.1 lysophospholipid acyltransferase family protein -
  AhaeAN59_RS05000 (AhaeAN59_05065) sppA 1060123..1061145 (+) 1023 WP_005084487.1 signal peptide peptidase SppA -
  AhaeAN59_RS05005 (AhaeAN59_05070) - 1061292..1062089 (+) 798 WP_005084488.1 alpha/beta fold hydrolase -
  AhaeAN59_RS05010 (AhaeAN59_05075) purN 1062136..1062765 (-) 630 WP_171456280.1 phosphoribosylglycinamide formyltransferase -
  AhaeAN59_RS05015 (AhaeAN59_05080) purM 1062762..1063832 (-) 1071 WP_005089611.1 phosphoribosylformylglycinamidine cyclo-ligase -

Sequence

Protein


Download         Length: 812 a.a.        Molecular weight: 93195.26 Da        Isoelectric Point: 9.0573

>NTDB_id=313007 AhaeAN59_RS04990 WP_160126531.1 1056600..1059038(+) (comA/comEC) [Acinetobacter haemolyticus strain AN59]
MLKIILLGWVAGIALMGMHFPIITSTWWLWLIIAFAIFGFGFYWKKQYFHYPTYKALLLISATWALFCTGYHYADIQLQQ
RLIFKEQNAETFEAIVYIKKISELNENGEKQVAEVLNRHAQSVNWFLHLRKEKDTSKVEPEFQLGHYYRVSGQIRPAHSY
AVPGAFDLEKWFLQQNVQSGFSVRNIQPIHEDELYQLGYHHHLQQQKSHWAIFLLAVEKKRLAFRQMLQASAFQHKGLLL
ALLTGDESLLSDAVKQQFQHLGISHLLAISGPHVLVFALILTWSLQKLIQRYCPSIYLKQPRQLLLLLPFIFSVLLYVAF
VGFEIPAMRTLLTVSIVSTFMCLRQSIQAFSVLVYSASLLLVLDPFSILSAAFWLSYGACFILIRIYQTIIQLPQNVNLT
FKQKMIWGSHILIESQWKIFVALLPLVLIFFQQVSWFAPLTNLIAIPLLGACIVPLDILAACVWLIIPTLGQWLFQMNDA
FLSFLMLILDVLQSISPQLYGISFTPWMMVSLIIGIFLLFLPRGVVPKLWAAVCFLPILWGVKAQPEALHVLDVGQGQAI
LVQHSKGNLLIDTGGSFDEAKFSMGERVVIPFLRQQGIRRLEHVVLSHLDQDHSGAFTSIQNSFEIDLVQSNEKHEKMQF
KENFSFCQQGQQWSFPNINIQVLFPRANELSYAKYQKNEYSCVLYVQFLDAQTYQNFLIMGDAGWETEYKLLQQYPDLKV
DVLILGHHGSKHSSAYEFLASLKPKLTIASAGFNNRYGHPSQEVLKRLQHLNIPILNTADAGTISFMMNNHDGVLLQHRK
KRKWLSKNSLSN

Nucleotide


Download         Length: 2439 bp        

>NTDB_id=313007 AhaeAN59_RS04990 WP_160126531.1 1056600..1059038(+) (comA/comEC) [Acinetobacter haemolyticus strain AN59]
ATGCTAAAAATTATTTTATTGGGGTGGGTTGCGGGTATCGCACTTATGGGAATGCATTTCCCGATCATTACATCTACATG
GTGGCTTTGGCTGATTATTGCATTCGCGATCTTTGGTTTCGGATTTTATTGGAAAAAGCAGTATTTTCATTATCCTACTT
ATAAAGCCTTGCTTTTAATCAGTGCGACTTGGGCATTATTTTGCACAGGTTATCATTATGCTGATATTCAATTACAACAA
CGTCTTATTTTTAAAGAACAAAATGCTGAAACATTTGAAGCCATTGTTTATATCAAAAAGATCAGTGAACTGAATGAAAA
TGGCGAGAAACAAGTTGCTGAGGTTTTGAATCGACATGCGCAAAGTGTGAATTGGTTTCTTCATTTAAGAAAAGAAAAAG
ACACATCTAAAGTAGAACCAGAATTTCAATTGGGTCATTACTATCGTGTATCTGGGCAAATTCGACCCGCCCATAGTTAT
GCCGTCCCTGGTGCATTCGATCTGGAAAAATGGTTTTTACAACAAAATGTGCAGTCGGGATTTTCTGTACGAAATATTCA
GCCTATTCATGAAGATGAACTCTATCAGCTGGGTTATCATCATCATTTGCAGCAACAAAAATCTCATTGGGCCATATTCT
TATTAGCTGTTGAAAAAAAGCGTTTGGCTTTTCGACAAATGCTACAGGCATCAGCATTCCAACATAAAGGGTTGCTATTG
GCTTTGCTCACAGGGGATGAGAGTCTTTTATCTGATGCCGTAAAACAACAATTTCAACACCTTGGGATTTCACATTTATT
GGCTATTTCTGGACCACATGTGTTGGTATTTGCATTGATACTGACTTGGTCATTACAAAAGTTGATTCAGCGCTACTGCC
CAAGCATCTATTTGAAGCAACCTCGACAATTACTACTATTGTTACCCTTTATCTTTAGTGTCTTGCTATATGTGGCATTT
GTTGGTTTTGAGATTCCAGCAATGAGAACATTATTAACCGTTAGCATTGTCAGTACTTTTATGTGCTTAAGACAGTCGAT
TCAGGCATTTAGTGTGTTGGTTTATAGTGCGAGCTTATTGTTAGTTTTAGATCCATTTAGCATTTTATCTGCTGCATTTT
GGTTATCTTATGGCGCGTGTTTTATTTTGATAAGAATCTATCAGACGATTATACAGTTACCACAAAATGTAAACTTAACA
TTTAAACAAAAAATGATCTGGGGTAGTCATATTCTGATTGAATCGCAATGGAAAATTTTTGTCGCGTTATTGCCTTTGGT
TTTGATTTTCTTTCAGCAAGTTTCATGGTTTGCCCCCTTAACGAATCTTATTGCTATCCCATTGTTAGGTGCTTGTATTG
TTCCTTTAGATATTCTAGCTGCATGTGTGTGGTTAATTATTCCTACATTAGGGCAGTGGTTATTTCAAATGAATGATGCG
TTTTTGTCATTCTTGATGCTGATTTTAGATGTACTTCAATCGATTTCGCCGCAGTTGTATGGGATAAGTTTCACTCCTTG
GATGATGGTGAGTTTAATTATCGGTATTTTTCTATTGTTCTTGCCTAGAGGTGTCGTTCCAAAGCTTTGGGCTGCTGTCT
GTTTCTTACCGATATTATGGGGTGTAAAAGCTCAACCCGAAGCATTGCATGTATTGGATGTTGGGCAAGGCCAAGCAATC
TTGGTACAACATTCAAAAGGTAATCTCCTGATTGATACTGGTGGATCATTTGATGAAGCCAAATTTAGTATGGGGGAACG
TGTGGTTATTCCATTTCTACGTCAACAGGGTATTCGGCGATTGGAGCATGTTGTGTTATCGCATTTGGATCAAGATCATA
GTGGCGCATTTACGTCGATTCAAAATAGTTTTGAAATTGATTTGGTTCAATCGAATGAAAAGCATGAAAAAATGCAATTT
AAGGAGAATTTTTCATTTTGCCAACAAGGTCAACAGTGGTCATTTCCAAACATCAACATCCAAGTTTTATTTCCTCGAGC
CAATGAATTGAGCTATGCGAAATATCAGAAAAATGAATATTCTTGTGTGCTCTATGTGCAATTTTTAGATGCTCAAACTT
ATCAGAACTTTTTGATTATGGGGGATGCAGGCTGGGAAACCGAATATAAATTGTTACAGCAGTATCCAGATTTAAAAGTC
GATGTGTTAATTCTTGGTCATCATGGCAGTAAGCATAGCTCTGCTTACGAATTTTTGGCAAGCCTCAAGCCCAAACTTAC
AATTGCTTCTGCGGGATTTAATAATCGTTACGGACATCCCAGTCAGGAGGTTTTAAAACGATTGCAGCACTTAAATATTC
CAATATTAAATACAGCAGATGCGGGTACGATTAGCTTTATGATGAATAATCATGATGGGGTGTTGCTACAGCATCGAAAA
AAAAGAAAATGGTTATCCAAAAATAGCCTAAGTAATTGA

Domains

Predicted by InterproScan.

Competence protein (Competence)

(242-523)

Domain of unknown function (DUF4131) (DUF4131)

(23-187)

Metallo-beta-lactamase superfamily (Lactamase_B)

(553-626)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A857II28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/comEC Acinetobacter baumannii D1279779

54.444

99.754

0.543
  comA/comEC Acinetobacter baumannii strain A118

53.951

99.754

0.538
  comA/comEC Acinetobacter baylyi ADP1

50.123

99.754

0.5

Multiple sequence alignment