Detailed information
Bioinformatically predicted
Overview
| Name | pilR | Type | Regulator |
| Locus tag | D0851_RS16405 | Genome accession | NZ_CP031848 |
| Coordinates | 3491496..3492884 (-) | Length | 462 a.a. |
| NCBI ID | WP_117619590.1 | Uniprot ID | A0A346S4E0 |
| Organism | Marinobacter sp. Arc7-DN-1 | ||
| Function | regulate pilin expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3486496..3497884
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D0851_RS16380 (D0851_16380) | - | 3486566..3487039 (+) | 474 | WP_117619585.1 | PilX N-terminal domain-containing pilus assembly protein | - |
| D0851_RS16385 (D0851_16385) | - | 3487073..3487441 (+) | 369 | WP_117619586.1 | hypothetical protein | - |
| D0851_RS16390 (D0851_16390) | - | 3487651..3490275 (+) | 2625 | WP_341581395.1 | pilus assembly protein | - |
| D0851_RS16395 (D0851_16395) | - | 3490279..3490731 (+) | 453 | WP_117619588.1 | type IV pilin protein | - |
| D0851_RS16400 (D0851_16400) | - | 3490804..3491370 (-) | 567 | WP_162893763.1 | GspH/FimT family pseudopilin | - |
| D0851_RS16405 (D0851_16405) | pilR | 3491496..3492884 (-) | 1389 | WP_117619590.1 | sigma-54-dependent transcriptional regulator | Regulator |
| D0851_RS16410 (D0851_16410) | - | 3492941..3494602 (-) | 1662 | WP_117619591.1 | sensor histidine kinase | - |
| D0851_RS16415 (D0851_16415) | - | 3494696..3496360 (+) | 1665 | WP_117619592.1 | NAD+ synthase | - |
| D0851_RS16420 (D0851_16420) | - | 3496428..3497261 (-) | 834 | WP_117620440.1 | outer membrane protein assembly factor BamD | - |
Sequence
Protein
Download Length: 462 a.a. Molecular weight: 50693.80 Da Isoelectric Point: 4.6763
>NTDB_id=311858 D0851_RS16405 WP_117619590.1 3491496..3492884(-) (pilR) [Marinobacter sp. Arc7-DN-1]
MTTYTALIVDDEPDIRELLEITLTRMGITTFTAPDLTSALALLEQNKPNLCLTDMNLPDGNGIELVQWIQQHAPATPVAV
ITAYGNMDTAIESLKAGAFDFVSKPVELPRLRELVNSALKLSEPKADSEDGADEPGLLLGKSPEIRKLRNQTRKLARSQA
PVFISGESGSGKELVARMIHLQGPRREGPFIAVNCGAIPSELMESEFFGHKKGSFTGAVENKDGLFRSANGGTLFLDEVA
DLPLAMQVKLLRAIQEKAVRPVGDTKEVPVDIRVLSATHKNLPELVQEGSFRQDLFYRINVIELAVPPLRERLDDIPILA
GHILERIAGEYECDPATLTPAAIERLKSYDFPGNVRELENVLERAFTLCDADQIDADDLHLGNGVQHAASPSQIIAEGQA
GEGENFTVPDGEIDLEGYLESIERQAIEKALEATRWNKTAAAKRLGISFRALRYRLKKLGME
MTTYTALIVDDEPDIRELLEITLTRMGITTFTAPDLTSALALLEQNKPNLCLTDMNLPDGNGIELVQWIQQHAPATPVAV
ITAYGNMDTAIESLKAGAFDFVSKPVELPRLRELVNSALKLSEPKADSEDGADEPGLLLGKSPEIRKLRNQTRKLARSQA
PVFISGESGSGKELVARMIHLQGPRREGPFIAVNCGAIPSELMESEFFGHKKGSFTGAVENKDGLFRSANGGTLFLDEVA
DLPLAMQVKLLRAIQEKAVRPVGDTKEVPVDIRVLSATHKNLPELVQEGSFRQDLFYRINVIELAVPPLRERLDDIPILA
GHILERIAGEYECDPATLTPAAIERLKSYDFPGNVRELENVLERAFTLCDADQIDADDLHLGNGVQHAASPSQIIAEGQA
GEGENFTVPDGEIDLEGYLESIERQAIEKALEATRWNKTAAAKRLGISFRALRYRLKKLGME
Nucleotide
Download Length: 1389 bp
>NTDB_id=311858 D0851_RS16405 WP_117619590.1 3491496..3492884(-) (pilR) [Marinobacter sp. Arc7-DN-1]
ATGACCACATACACAGCGCTGATCGTTGACGACGAACCGGACATCCGGGAACTGCTGGAAATCACCCTCACCCGAATGGG
CATAACCACCTTCACGGCACCCGACCTGACCAGCGCTCTGGCGCTGCTGGAGCAGAACAAACCGAACCTCTGCCTCACCG
ACATGAACCTGCCGGACGGCAATGGTATCGAACTGGTTCAGTGGATCCAGCAGCATGCTCCGGCAACACCGGTGGCCGTC
ATTACCGCCTACGGCAATATGGACACGGCGATTGAATCCCTCAAAGCCGGGGCTTTCGATTTTGTTTCCAAGCCGGTGGA
ACTGCCCCGCTTAAGAGAGCTGGTAAACAGTGCGCTCAAGCTCTCGGAGCCCAAGGCGGACTCGGAAGATGGAGCCGACG
AGCCCGGCCTGCTACTCGGTAAATCTCCGGAGATCCGGAAACTCCGGAACCAGACCCGAAAGCTGGCCAGAAGCCAGGCG
CCGGTATTCATCAGTGGTGAGTCCGGCAGTGGTAAGGAACTGGTTGCCCGAATGATTCACCTTCAGGGCCCCCGCCGGGA
GGGACCTTTCATTGCCGTGAACTGTGGTGCGATTCCCTCGGAACTCATGGAGAGTGAATTCTTCGGGCACAAGAAAGGCA
GCTTTACCGGGGCTGTGGAAAACAAGGACGGCCTGTTCCGCTCTGCCAACGGTGGCACTCTGTTTCTGGATGAAGTCGCA
GACCTGCCGCTGGCCATGCAGGTGAAACTGCTCAGGGCCATCCAGGAAAAAGCGGTCCGACCAGTAGGTGACACCAAGGA
AGTACCGGTAGATATCCGGGTGCTGAGCGCCACCCATAAAAACCTGCCGGAACTGGTTCAGGAAGGCAGCTTCCGCCAGG
ACCTGTTCTACCGGATTAACGTGATCGAACTGGCTGTTCCGCCTTTGCGGGAGCGGCTCGATGATATCCCCATACTCGCC
GGCCACATTCTTGAACGTATTGCCGGAGAGTACGAATGCGATCCGGCCACGTTAACTCCCGCTGCGATAGAGCGCCTCAA
GAGCTACGATTTTCCCGGAAACGTGCGGGAATTGGAGAATGTTCTGGAACGCGCGTTTACCCTGTGCGATGCCGACCAGA
TTGACGCTGACGATCTGCATCTCGGGAATGGTGTACAGCATGCCGCATCGCCCTCACAGATTATTGCCGAGGGCCAGGCC
GGCGAAGGTGAGAATTTTACCGTGCCGGATGGTGAAATCGATCTGGAAGGATACCTGGAAAGCATCGAACGGCAAGCGAT
TGAGAAGGCTCTGGAGGCGACCCGCTGGAACAAGACGGCGGCGGCGAAGCGGTTGGGGATCAGTTTTCGGGCGTTGCGGT
ATCGATTGAAGAAGTTGGGGATGGAGTAA
ATGACCACATACACAGCGCTGATCGTTGACGACGAACCGGACATCCGGGAACTGCTGGAAATCACCCTCACCCGAATGGG
CATAACCACCTTCACGGCACCCGACCTGACCAGCGCTCTGGCGCTGCTGGAGCAGAACAAACCGAACCTCTGCCTCACCG
ACATGAACCTGCCGGACGGCAATGGTATCGAACTGGTTCAGTGGATCCAGCAGCATGCTCCGGCAACACCGGTGGCCGTC
ATTACCGCCTACGGCAATATGGACACGGCGATTGAATCCCTCAAAGCCGGGGCTTTCGATTTTGTTTCCAAGCCGGTGGA
ACTGCCCCGCTTAAGAGAGCTGGTAAACAGTGCGCTCAAGCTCTCGGAGCCCAAGGCGGACTCGGAAGATGGAGCCGACG
AGCCCGGCCTGCTACTCGGTAAATCTCCGGAGATCCGGAAACTCCGGAACCAGACCCGAAAGCTGGCCAGAAGCCAGGCG
CCGGTATTCATCAGTGGTGAGTCCGGCAGTGGTAAGGAACTGGTTGCCCGAATGATTCACCTTCAGGGCCCCCGCCGGGA
GGGACCTTTCATTGCCGTGAACTGTGGTGCGATTCCCTCGGAACTCATGGAGAGTGAATTCTTCGGGCACAAGAAAGGCA
GCTTTACCGGGGCTGTGGAAAACAAGGACGGCCTGTTCCGCTCTGCCAACGGTGGCACTCTGTTTCTGGATGAAGTCGCA
GACCTGCCGCTGGCCATGCAGGTGAAACTGCTCAGGGCCATCCAGGAAAAAGCGGTCCGACCAGTAGGTGACACCAAGGA
AGTACCGGTAGATATCCGGGTGCTGAGCGCCACCCATAAAAACCTGCCGGAACTGGTTCAGGAAGGCAGCTTCCGCCAGG
ACCTGTTCTACCGGATTAACGTGATCGAACTGGCTGTTCCGCCTTTGCGGGAGCGGCTCGATGATATCCCCATACTCGCC
GGCCACATTCTTGAACGTATTGCCGGAGAGTACGAATGCGATCCGGCCACGTTAACTCCCGCTGCGATAGAGCGCCTCAA
GAGCTACGATTTTCCCGGAAACGTGCGGGAATTGGAGAATGTTCTGGAACGCGCGTTTACCCTGTGCGATGCCGACCAGA
TTGACGCTGACGATCTGCATCTCGGGAATGGTGTACAGCATGCCGCATCGCCCTCACAGATTATTGCCGAGGGCCAGGCC
GGCGAAGGTGAGAATTTTACCGTGCCGGATGGTGAAATCGATCTGGAAGGATACCTGGAAAGCATCGAACGGCAAGCGAT
TGAGAAGGCTCTGGAGGCGACCCGCTGGAACAAGACGGCGGCGGCGAAGCGGTTGGGGATCAGTTTTCGGGCGTTGCGGT
ATCGATTGAAGAAGTTGGGGATGGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilR | Pseudomonas aeruginosa PAK |
64.579 |
100 |
0.647 |
| pilR | Acinetobacter baumannii strain A118 |
53.362 |
99.784 |
0.532 |
| luxO | Vibrio cholerae strain A1552 |
36.703 |
98.485 |
0.361 |