Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   D0819_RS11725 Genome accession   NZ_CP031784
Coordinates   2231123..2231989 (-) Length   288 a.a.
NCBI ID   WP_021480498.1    Uniprot ID   -
Organism   Bacillus subtilis strain HMNig-2     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 2226123..2236989
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D0819_RS11690 (D0819_11725) mrpE 2226325..2226801 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  D0819_RS11695 (D0819_11730) mrpF 2226801..2227085 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  D0819_RS11700 (D0819_11735) mnhG 2227069..2227443 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  D0819_RS11705 (D0819_11740) yuxO 2227482..2227862 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  D0819_RS11710 (D0819_11745) comA 2227881..2228525 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  D0819_RS11715 (D0819_11750) comP 2228606..2230917 (-) 2312 Protein_2312 two-component system sensor histidine kinase ComP -
  D0819_RS11720 (D0819_11755) comX 2230934..2231107 (-) 174 WP_021480497.1 competence pheromone ComX -
  D0819_RS11725 (D0819_11760) comQ 2231123..2231989 (-) 867 WP_021480498.1 polyprenyl synthetase family protein Regulator
  D0819_RS11730 (D0819_11765) degQ 2232174..2232314 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  D0819_RS21725 - 2232536..2232598 (+) 63 Protein_2316 hypothetical protein -
  D0819_RS11735 (D0819_11770) - 2232776..2233144 (+) 369 WP_038828672.1 hypothetical protein -
  D0819_RS11740 (D0819_11775) pdeH 2233120..2234349 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  D0819_RS11745 (D0819_11780) pncB 2234486..2235958 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  D0819_RS11750 (D0819_11785) pncA 2235974..2236525 (-) 552 WP_021480500.1 isochorismatase family cysteine hydrolase -

Sequence


Protein


Download         Length: 288 a.a.        Molecular weight: 32923.14 Da        Isoelectric Point: 6.6393

>NTDB_id=311394 D0819_RS11725 WP_021480498.1 2231123..2231989(-) (comQ) [Bacillus subtilis strain HMNig-2]
MKEIVKQNIFEDDLLKLLNLFIESRNFFPFAESAFLHYCVFGGKEFEIAIELGAGIEIITLSSDILDDIQDNDNLTAPWM
NIDQSVALSSVFSLYTVGLQSLKAVDPKSDIVNSILKYCLDAMQGQHRDIINKPQTEEDCLEAMKLKCGSLFALANVSGT
MLATGTYNKVVESYSYSKGIFEQIYGDYSALFNPNRSDILKDKHTLVNLYLKRLFNKDSEELLTIFKNKNFFYGLLSKKE
FMEKLKKAGVTQYASVLHKIYKKKCETDIEKLNLDKHKIELIKKQLLK

Nucleotide


Download         Length: 867 bp        

>NTDB_id=311394 D0819_RS11725 WP_021480498.1 2231123..2231989(-) (comQ) [Bacillus subtilis strain HMNig-2]
ATGAAGGAAATTGTTAAACAAAATATTTTCGAGGATGATTTATTAAAGCTTCTTAATTTATTTATAGAATCAAGAAATTT
CTTTCCTTTTGCCGAATCAGCTTTTTTGCACTATTGTGTTTTTGGCGGAAAGGAATTTGAGATTGCTATAGAATTAGGAG
CAGGGATCGAAATTATCACGCTATCTTCAGACATCCTAGATGATATTCAAGATAATGATAACTTAACAGCACCCTGGATG
AATATTGATCAGTCTGTAGCTTTAAGTTCAGTGTTCTCATTGTATACAGTAGGGCTACAAAGCTTAAAAGCAGTTGATCC
TAAATCAGATATTGTGAATAGTATATTAAAATACTGTCTTGATGCAATGCAAGGGCAGCATAGAGATATCATTAATAAAC
CGCAGACAGAAGAGGATTGTCTTGAAGCCATGAAATTAAAATGCGGCAGTTTGTTCGCACTTGCCAATGTTTCTGGTACT
ATGCTAGCAACTGGCACTTATAACAAAGTCGTTGAAAGTTACTCGTATTCAAAGGGGATTTTTGAACAGATTTACGGAGA
TTATTCTGCACTATTTAATCCCAACAGAAGCGATATTTTGAAAGATAAACATACTTTAGTTAACTTGTATCTTAAACGCT
TGTTCAATAAGGATTCCGAAGAATTGCTTACAATATTTAAGAATAAAAACTTTTTTTATGGATTATTATCTAAGAAAGAG
TTCATGGAAAAATTAAAAAAGGCTGGAGTTACACAATACGCTTCAGTATTACACAAAATTTACAAAAAGAAATGCGAGAC
TGACATTGAAAAATTAAATCTGGATAAACATAAAATTGAATTAATAAAAAAACAATTATTAAAATGA

Domains


Predicted by InterproScan.

(44-229)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

59.028

100

0.59


Multiple sequence alignment