Detailed information NTG0311338

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: D0808_RS20560
• Genome accession: NZ_CP031783
• Coordinates: 4003995..4004717 (-)
• Length: 240 a.a.
• NCBI ID: WP_153256547.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain MENO2 voucher National Research Centre
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3998995..4009717

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D0808_RS20525 (D0808_20675)	fliW	3999135..3999566 (-)	432	WP_077671018.1	flagellar assembly protein FliW	-
D0808_RS20530 (D0808_20680)	yviE	3999587..4000162 (-)	576	WP_015384781.1	DUF6470 family protein	-
D0808_RS20535 (D0808_20685)	flgL	4000209..4001105 (-)	897	WP_015714797.1	flagellar hook-associated protein FlgL	-
D0808_RS20540 (D0808_20690)	flgK	4001116..4002639 (-)	1524	WP_003228001.1	flagellar hook-associated protein FlgK	-
D0808_RS20545 (D0808_20695)	flgN	4002658..4003140 (-)	483	WP_014481048.1	flagellar protein FlgN	-
D0808_RS20550 (D0808_20700)	flgM	4003156..4003422 (-)	267	WP_015384783.1	flagellar biosynthesis anti-sigma factor FlgM	-
D0808_RS20555 (D0808_20705)	yvyF	4003503..4003922 (-)	420	WP_003227995.1	TIGR03826 family flagellar region protein	-
D0808_RS20560 (D0808_20710)	comFC	4003995..4004717 (-)	723	WP_153256547.1	comF operon protein ComFC	Machinery gene
D0808_RS20565 (D0808_20715)	comFB	4004681..4004977 (-)	297	WP_015483764.1	late competence protein ComFB	-
D0808_RS20570 (D0808_20720)	comFA	4005037..4006428 (-)	1392	WP_153256548.1	ATP-dependent helicase ComFA	Machinery gene
D0808_RS20575 (D0808_20725)	fakBA	4006535..4007380 (-)	846	WP_003227986.1	DegV family protein	-
D0808_RS20580 (D0808_20730)	degU	4007478..4008167 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
D0808_RS20585 (D0808_20735)	degS	4008250..4009407 (-)	1158	WP_003227983.1	two-component sensor histidine kinase DegS	Regulator

Sequence

Protein

• Length: 240 a.a.
• Molecular weight: 27495.71 Da
• Isoelectric Point: 9.3154

>NTDB_id=311338 D0808_RS20560 WP_153256547.1 4003995..4004717(-) (comFC) [Bacillus subtilis strain MENO2 voucher National Research Centre]
MSNEAGGGIHKLICLLCDSQFSQDVTWRALFLLKPDEKVCYSCRSKLKKITGHICPLCGRPQSVHAVCRDCEVWRTRSRD
SLLLRQNRSVYTYNDMMKETLSRFKFRGDAEIINAFKSDFSSTFSKVYPDKHFVLVPIPLSKEREEERGFNQAQLLAECL
DRPSHHPLIRLNNEKQSKKKKTERLLSERIFDTKNNSAEGMNIILIDDLYTTGATLHFAARCLLEKGKAASVSSFTLIRS

Nucleotide

• Length: 723 bp

>NTDB_id=311338 D0808_RS20560 WP_153256547.1 4003995..4004717(-) (comFC) [Bacillus subtilis strain MENO2 voucher National Research Centre]
ATGTCAAACGAAGCAGGAGGAGGCATTCATAAACTGATCTGTTTATTATGTGATTCGCAATTTTCTCAAGATGTTACATG
GAGAGCCCTTTTTTTATTAAAGCCTGATGAAAAGGTTTGTTATTCTTGCAGAAGCAAATTAAAGAAAATCACAGGACATA
TCTGCCCCCTGTGCGGCAGACCTCAATCTGTTCATGCCGTATGCAGGGATTGCGAGGTGTGGAGAACAAGGAGCAGAGAC
AGTTTGCTATTGCGTCAAAACCGTTCAGTTTACACATATAATGATATGATGAAAGAAACGCTCTCCCGTTTTAAATTTAG
AGGAGATGCAGAAATCATAAATGCATTTAAAAGTGATTTTTCTTCAACCTTTTCTAAGGTTTACCCCGATAAGCATTTTG
TTCTTGTACCTATTCCGCTGAGCAAGGAACGGGAAGAAGAGCGCGGATTTAACCAGGCACAGCTCTTGGCAGAATGTTTA
GACCGGCCTTCCCACCATCCCCTCATTCGCCTGAATAATGAGAAACAGTCAAAGAAAAAGAAAACAGAACGCCTGCTGTC
AGAGCGCATTTTTGATACAAAAAATAATTCAGCAGAAGGTATGAATATCATTTTAATAGACGATCTTTATACAACAGGCG
CCACCTTGCACTTCGCAGCCCGCTGCTTATTAGAAAAAGGAAAAGCCGCTTCAGTGTCATCTTTTACCTTGATCAGAAGC
TAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (14-71)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	98.75	100	0.988