Detailed information NTG0031131

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: CJA_RS15445
• Genome accession: NC_010995
• Coordinates: 3828504..3829907 (+)
• Length: 467 a.a.
• NCBI ID: WP_012488786.1
• Uniprot ID: B3PE06
• Organism: Cellvibrio japonicus Ueda107
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3823504..3834907

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CJA_RS15430 (CJA_3206)	-	3824013..3824930 (+)	918	WP_041551619.1	outer membrane protein assembly factor BamD	-
CJA_RS15435 (CJA_3207)	-	3824981..3826603 (-)	1623	WP_041551621.1	NAD+ synthase	-
CJA_RS15440 (CJA_3208)	-	3826810..3828480 (+)	1671	WP_012488785.1	sensor histidine kinase	-
CJA_RS15445 (CJA_3209)	pilR	3828504..3829907 (+)	1404	WP_012488786.1	sigma-54-dependent transcriptional regulator	Regulator
CJA_RS15450 (CJA_3210)	-	3830044..3830454 (-)	411	WP_041551623.1	type IV pilin protein	-

Sequence

Protein

• Length: 467 a.a.
• Molecular weight: 51814.12 Da
• Isoelectric Point: 5.6335

>NTDB_id=31131 CJA_RS15445 WP_012488786.1 3828504..3829907(+) (pilR) [Cellvibrio japonicus Ueda107]
MTMKRALIIDDEPDIRELLEITLGRMQITTDAAANIAQAKSHLNCNHYDLCLTDMRLPDGSGLELVEYIQQQHPGLPVAV
ITAHGSIDTAIESMKAGAFDFISKPVDLATLRRLVNTAIESAQLPPQEPPQTTPIIGHSKAIQDLIRSIQKLARSQAPVY
ISGESGSGKELVARSIHDLGPRSSKPFIAVNCGAIPRELMESEFFGHKKGSFTGAHQDKTGLFQAAEGGTLFFDEVADLP
IDMQVKLLRAIQEKSVRPIGAAEEITTDVRILCATHKNLEKEVAEGRFRQDLFYRLNVIQLAVAPLRDRKEDIPLLTQHL
LQKLATEIGLPTPHLSPAAQKRLEEYHFPGNVRELENVLERAFTLCDSDTIEAEDLQLRGSTNSIRPVIEAGQLPGSQTP
ARNNTVDYPARCAEYPSLDEYLQDVEKEILCSALEQARWNKTLAAKHLGISFRSLRYRLQKLGLEDE

Nucleotide

• Length: 1404 bp

>NTDB_id=31131 CJA_RS15445 WP_012488786.1 3828504..3829907(+) (pilR) [Cellvibrio japonicus Ueda107]
ATGACCATGAAACGCGCCCTGATTATTGATGATGAGCCCGATATCCGTGAGCTCCTCGAAATCACGTTGGGTAGAATGCA
AATTACAACCGATGCAGCTGCCAATATTGCACAAGCAAAAAGCCATCTTAATTGCAATCACTATGATCTATGCCTGACTG
ATATGCGCCTACCTGATGGCAGCGGGCTTGAGCTGGTTGAATATATACAACAACAACACCCGGGGTTACCCGTTGCGGTA
ATTACCGCACATGGCAGCATAGACACCGCGATTGAGTCAATGAAAGCTGGTGCCTTTGATTTCATCTCAAAACCTGTTGA
CCTGGCAACATTACGCCGCCTGGTCAACACGGCTATTGAGTCAGCCCAACTACCCCCGCAGGAACCGCCTCAAACAACAC
CGATTATCGGCCATTCAAAAGCAATCCAGGATCTTATCCGCAGTATTCAAAAACTGGCTCGCTCACAAGCCCCAGTGTAC
ATCAGCGGAGAATCCGGCTCCGGAAAGGAGTTGGTAGCACGCTCCATACATGACCTGGGCCCCAGATCCAGTAAACCATT
TATTGCGGTTAACTGTGGGGCAATTCCACGTGAACTAATGGAGAGTGAATTTTTTGGTCATAAAAAAGGAAGCTTCACCG
GTGCACACCAGGACAAAACGGGATTATTTCAAGCCGCTGAAGGAGGGACTTTATTTTTTGATGAAGTTGCCGACCTTCCT
ATCGATATGCAAGTCAAACTCTTGCGTGCCATCCAGGAAAAATCTGTCCGCCCCATAGGGGCGGCAGAAGAAATAACCAC
CGATGTACGTATACTCTGTGCAACACATAAAAACCTGGAGAAGGAAGTTGCCGAAGGCCGCTTTCGCCAAGATTTATTTT
ATCGACTCAATGTGATTCAACTTGCCGTTGCGCCATTACGCGATAGAAAAGAAGACATTCCTCTTCTTACCCAACACTTG
TTACAAAAACTGGCAACGGAAATAGGTTTACCAACACCGCATTTATCACCCGCCGCACAAAAACGACTGGAAGAGTATCA
TTTTCCCGGCAACGTTCGCGAACTGGAAAACGTCCTGGAAAGGGCATTTACACTGTGTGACAGCGATACGATAGAAGCAG
AAGATTTACAACTCAGAGGCAGCACAAATAGCATTAGACCTGTGATTGAAGCAGGGCAATTGCCAGGCAGCCAAACACCT
GCTCGCAACAATACTGTCGACTACCCTGCACGTTGCGCAGAATATCCATCGCTGGACGAATATCTTCAGGATGTAGAAAA
AGAAATACTATGCTCTGCACTTGAGCAGGCCAGGTGGAACAAAACCCTGGCCGCCAAGCATTTGGGAATCAGCTTTCGCT
CATTGCGATATCGCTTGCAAAAGCTGGGATTGGAGGATGAATGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-115)

• Bacterial regulatory protein, Fis family (HTH_8) (422-462)

• Sigma-54 interaction domain (Sigma54_activat) (135-301)

3D structure

• AlphaFold DB: B3PE06

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	59.785	99.572	0.595
pilR	Acinetobacter baumannii strain A118	49.787	100	0.501