Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   DDV21_RS08320 Genome accession   NZ_CP031733
Coordinates   1750564..1751565 (-) Length   333 a.a.
NCBI ID   WP_116879004.1    Uniprot ID   A0A372KL90
Organism   Streptococcus chenjunshii strain Z15     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1745564..1756565
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DDV21_RS08305 (DDV21_008305) - 1746143..1747483 (-) 1341 WP_116879001.1 glycosyltransferase family 4 protein -
  DDV21_RS08310 (DDV21_008310) - 1747485..1748483 (-) 999 WP_116879002.1 glycosyltransferase -
  DDV21_RS08315 (DDV21_008315) - 1748823..1750289 (-) 1467 WP_116879003.1 alpha-amylase -
  DDV21_RS08320 (DDV21_008320) ccpA 1750564..1751565 (-) 1002 WP_116879004.1 catabolite control protein A Regulator
  DDV21_RS08325 (DDV21_008325) - 1751787..1752872 (+) 1086 WP_116879005.1 Xaa-Pro peptidase family protein -
  DDV21_RS08330 (DDV21_008330) - 1753066..1753815 (-) 750 WP_116879006.1 ChbG/HpnK family deacetylase -
  DDV21_RS08335 (DDV21_008335) - 1754175..1755427 (+) 1253 Protein_1594 IS110 family transposase -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36791.86 Da        Isoelectric Point: 5.7648

>NTDB_id=310847 DDV21_RS08320 WP_116879004.1 1750564..1751565(-) (ccpA) [Streptococcus chenjunshii strain Z15]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNISNSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPIVLAGTVDLEHQLPS
VNIDYKQATTDLVDILAKRHSNIAFVSGPLIDDINGKIRLAGYREGLKKNQLDFKEGLVFEAKYSYKEGYDLAQRVINSG
ATAAVVAEDELAAGLLNGLFAAGRKVPEDFEIMTSNDSPITQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGITERGTTR

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=310847 DDV21_RS08320 WP_116879004.1 1750564..1751565(-) (ccpA) [Streptococcus chenjunshii strain Z15]
ATGAACACAGATGACACAATTACAATTTATGATGTTGCCAGAGAAGCCGGTGTGTCGATGGCAACAGTCAGCCGGGTTGT
TAACGGAAACAAGAACGTTAAAGAGAATACGCGGAAAAAAGTTCTTGAAGTTATTGACCGTCTGGATTACCGCCCCAATG
CTGTTGCACGAGGTTTGGCCAGCAAGAAGACAACCACTGTCGGTGTTGTCATTCCTAATATCTCTAATAGCTACTTCTCT
ATTCTCGCTAAGGGAATTGATGATATCGCTGCAATGTATAAATATAACATCGTTTTAGCTTCCAGCGATGAAGATGATGA
TAAGGAAGTCAATGTTGTCAATACACTTTTTGCCAAGCAGGTAGATGGTATTATTTTTATGGGGCATCATTTAACAGAAA
AAATCCGGGCAGAATTTTCTCGTTCACGGACACCGATAGTCCTTGCGGGAACTGTTGACTTGGAACACCAGCTGCCTAGT
GTCAATATTGATTACAAACAGGCCACAACTGATCTTGTCGATATCTTGGCTAAGAGGCACAGCAACATTGCTTTTGTTTC
CGGACCTTTGATTGATGATATCAATGGGAAAATCCGTTTGGCTGGCTATAGAGAAGGGCTTAAGAAAAATCAGCTGGACT
TTAAAGAAGGTCTGGTCTTTGAAGCTAAATACAGCTATAAAGAAGGCTATGATTTGGCTCAGCGTGTTATCAATTCTGGA
GCTACGGCTGCAGTAGTGGCTGAGGATGAATTGGCTGCAGGTCTGCTGAATGGATTATTTGCTGCAGGCCGAAAAGTTCC
CGAAGATTTTGAAATTATGACCAGCAATGATTCGCCAATCACCCAGTATACTCGCCCTAACCTCAGCTCAATCAGCCAGC
CGGTTTATGACTTAGGTGCTGTCAGTATGCGGATGCTGACAAAAATCATGAATAAGGAAGAGTTGGAGGAAAAAGAGATT
CTGCTTAACCACGGTATAACTGAACGCGGAACAACTCGATAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A372KL90

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

80.18

100

0.802
  ccpA Streptococcus pneumoniae D39

78.979

100

0.79
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.988

100

0.562

Multiple sequence alignment