Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   D0C16_RS16210 Genome accession   NZ_CP031728
Coordinates   3833118..3833513 (+) Length   131 a.a.
NCBI ID   WP_007639219.1    Uniprot ID   -
Organism   Cellvibrio sp. KY-GH-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3828118..3838513
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D0C16_RS16185 (D0C16_16445) pilU 3828567..3829712 (+) 1146 WP_151033309.1 PilT/PilU family type 4a pilus ATPase Machinery gene
  D0C16_RS16190 (D0C16_16450) ruvX 3829781..3830194 (-) 414 WP_151033310.1 Holliday junction resolvase RuvX -
  D0C16_RS16195 (D0C16_16455) - 3830214..3830807 (-) 594 WP_151033311.1 YqgE/AlgH family protein -
  D0C16_RS16200 (D0C16_16460) - 3830871..3831791 (-) 921 WP_151033312.1 energy transducer TonB -
  D0C16_RS16205 (D0C16_16465) gshB 3831812..3832765 (-) 954 WP_151033313.1 glutathione synthase -
  D0C16_RS16210 (D0C16_16470) pilG 3833118..3833513 (+) 396 WP_007639219.1 twitching motility response regulator PilG Regulator
  D0C16_RS16215 (D0C16_16475) pilH 3833648..3834010 (+) 363 WP_151033314.1 twitching motility response regulator PilH -
  D0C16_RS16220 (D0C16_16480) - 3834146..3834688 (+) 543 WP_151033315.1 chemotaxis protein CheW -
  D0C16_RS16225 (D0C16_16485) - 3834862..3837018 (+) 2157 WP_151033316.1 methyl-accepting chemotaxis protein -
  D0C16_RS16230 (D0C16_16490) - 3837103..3837957 (+) 855 WP_151033317.1 protein-glutamate O-methyltransferase CheR -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14472.94 Da        Isoelectric Point: 8.4809

>NTDB_id=310798 D0C16_RS16210 WP_007639219.1 3833118..3833513(+) (pilG) [Cellvibrio sp. KY-GH-1]
MEVTYESLKVMVIDDSKTIRRTAETLLKKAGCMVITATDGFDALAKIADTRPDIIFVDIMMPRLDGYQTCALIKNNSEFK
TTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKSELLGAIEAHVKHLKAS

Nucleotide


Download         Length: 396 bp        

>NTDB_id=310798 D0C16_RS16210 WP_007639219.1 3833118..3833513(+) (pilG) [Cellvibrio sp. KY-GH-1]
ATGGAAGTAACTTACGAAAGCCTGAAAGTGATGGTTATAGACGACAGTAAAACCATCCGTCGCACGGCTGAAACACTGCT
CAAAAAAGCGGGTTGTATGGTGATTACCGCCACCGATGGCTTCGATGCTCTGGCAAAAATCGCCGACACCCGCCCCGACA
TTATTTTTGTGGACATTATGATGCCGCGTCTCGACGGTTATCAGACTTGCGCCCTGATCAAAAATAATAGCGAGTTCAAA
ACCACCCCGGTCATCATGTTATCCAGTAAAGATGGATTGTTCGACAAAGCCAAAGGGCGCATTGTCGGCTCTGACCAATA
CCTCACCAAACCCTTCAGCAAAAGCGAGTTGCTCGGTGCTATCGAAGCGCACGTCAAGCATCTAAAGGCATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

95.42

0.725
  vicR Streptococcus mutans UA159

43.22

90.076

0.389

Multiple sequence alignment