Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | D0T90_RS05010 | Genome accession | NZ_CP031699 |
| Coordinates | 1091494..1091781 (+) | Length | 95 a.a. |
| NCBI ID | WP_126325826.1 | Uniprot ID | A0A5P3MS29 |
| Organism | Neisseria animalis strain ATCC 49930 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1086494..1096781
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D0T90_RS05010 (D0T90_05200) | comE | 1091494..1091781 (+) | 288 | WP_126325826.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| D0T90_RS05015 (D0T90_05205) | rpsL | 1091998..1092369 (+) | 372 | WP_002218431.1 | 30S ribosomal protein S12 | - |
| D0T90_RS05020 (D0T90_05210) | rpsG | 1092486..1092956 (+) | 471 | WP_123796429.1 | 30S ribosomal protein S7 | - |
| D0T90_RS05025 (D0T90_05215) | fusA | 1092975..1095080 (+) | 2106 | WP_123796428.1 | elongation factor G | - |
| D0T90_RS05030 (D0T90_05220) | tuf | 1095184..1096368 (+) | 1185 | WP_126325827.1 | elongation factor Tu | - |
| D0T90_RS05035 (D0T90_05225) | rpsJ | 1096385..1096696 (+) | 312 | WP_002642322.1 | 30S ribosomal protein S10 | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 9807.51 Da Isoelectric Point: 10.7076
>NTDB_id=310514 D0T90_RS05010 WP_126325826.1 1091494..1091781(+) (comE) [Neisseria animalis strain ATCC 49930]
MKKFLFGALAALAAGLSLAAVNINTAAQSELEALPGIGPAKAKAIVAYRQQNGGFKTTEELKNVKGIGEGIYGKLKAEVT
VAPVQNKRKAVPASK
MKKFLFGALAALAAGLSLAAVNINTAAQSELEALPGIGPAKAKAIVAYRQQNGGFKTTEELKNVKGIGEGIYGKLKAEVT
VAPVQNKRKAVPASK
Nucleotide
Download Length: 288 bp
>NTDB_id=310514 D0T90_RS05010 WP_126325826.1 1091494..1091781(+) (comE) [Neisseria animalis strain ATCC 49930]
ATGAAAAAATTCCTGTTCGGTGCGCTGGCTGCGTTGGCGGCAGGCTTGTCGTTGGCGGCGGTAAACATCAATACGGCCGC
TCAGAGCGAGTTGGAGGCCCTGCCGGGCATCGGCCCTGCGAAAGCCAAAGCGATTGTGGCCTACCGTCAGCAGAACGGCG
GTTTCAAAACGACGGAAGAGCTGAAGAATGTGAAGGGTATCGGTGAGGGAATTTATGGCAAACTGAAGGCCGAGGTCACG
GTGGCGCCGGTACAGAACAAACGTAAGGCCGTGCCGGCTAGCAAGTAG
ATGAAAAAATTCCTGTTCGGTGCGCTGGCTGCGTTGGCGGCAGGCTTGTCGTTGGCGGCGGTAAACATCAATACGGCCGC
TCAGAGCGAGTTGGAGGCCCTGCCGGGCATCGGCCCTGCGAAAGCCAAAGCGATTGTGGCCTACCGTCAGCAGAACGGCG
GTTTCAAAACGACGGAAGAGCTGAAGAATGTGAAGGGTATCGGTGAGGGAATTTATGGCAAACTGAAGGCCGAGGTCACG
GTGGCGCCGGTACAGAACAAACGTAAGGCCGTGCCGGCTAGCAAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Neisseria gonorrhoeae MS11 |
52.041 |
100 |
0.537 |
| comE | Neisseria gonorrhoeae MS11 |
52.041 |
100 |
0.537 |
| comE | Neisseria gonorrhoeae MS11 |
52.041 |
100 |
0.537 |
| comE | Neisseria gonorrhoeae MS11 |
52.041 |
100 |
0.537 |
| Cj0011c | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
50.602 |
87.368 |
0.442 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
44.444 |
85.263 |
0.379 |