Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   E4K03_RS00640 Genome accession   NZ_CP038262
Coordinates   138486..139121 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain LEV1449/17Ec     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 133486..144121
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E4K03_RS00620 (E4K03_00620) - 133565..134380 (+) 816 WP_000011163.1 DsbC family protein -
  E4K03_RS00625 (E4K03_00625) - 134625..135926 (+) 1302 WP_039254228.1 homoserine dehydrogenase -
  E4K03_RS00630 (E4K03_00630) thrC 135982..137121 (+) 1140 WP_000063596.1 threonine synthase -
  E4K03_RS00635 (E4K03_00635) pbpG 137227..138273 (-) 1047 WP_001984577.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  E4K03_RS00640 (E4K03_00640) letA 138486..139121 (+) 636 WP_000633799.1 response regulator Regulator
  E4K03_RS00645 (E4K03_00645) pilS 139132..140700 (+) 1569 WP_202977410.1 PAS domain-containing sensor histidine kinase Regulator
  E4K03_RS00650 (E4K03_00650) - 140724..142145 (+) 1422 WP_135013338.1 sigma-54 dependent transcriptional regulator -
  E4K03_RS00655 (E4K03_00655) - 142149..143333 (-) 1185 WP_000939107.1 S41 family peptidase -

Sequence


Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=310495 E4K03_RS00640 WP_000633799.1 138486..139121(+) (letA) [Acinetobacter baumannii strain LEV1449/17Ec]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=310495 E4K03_RS00640 WP_000633799.1 138486..139121(+) (letA) [Acinetobacter baumannii strain LEV1449/17Ec]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTGCTGCTGG
ATGTCAACATGCCGGGCATCGGTGGTGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTTGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAACCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55

  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55


Multiple sequence alignment