Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | DXY21_RS12215 | Genome accession | NZ_CP031694 |
| Coordinates | 2386313..2386579 (+) | Length | 88 a.a. |
| NCBI ID | WP_042635730.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain SRCM101368 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2381313..2391579
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXY21_RS12195 (DXY21_02432) | - | 2381583..2382884 (-) | 1302 | WP_014305416.1 | hemolysin family protein | - |
| DXY21_RS12200 (DXY21_02433) | - | 2383030..2383980 (+) | 951 | WP_003153082.1 | magnesium transporter CorA family protein | - |
| DXY21_RS12205 (DXY21_02434) | comGA | 2384172..2385242 (+) | 1071 | WP_003153083.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DXY21_RS12210 (DXY21_02435) | comGB | 2385229..2386266 (+) | 1038 | WP_003153086.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DXY21_RS12215 (DXY21_02436) | comGC | 2386313..2386579 (+) | 267 | WP_042635730.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DXY21_RS12220 (DXY21_02437) | comGD | 2386569..2387006 (+) | 438 | WP_003153088.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| DXY21_RS12225 (DXY21_02438) | comGE | 2386990..2387304 (+) | 315 | WP_003153089.1 | competence type IV pilus minor pilin ComGE | - |
| DXY21_RS12230 (DXY21_02439) | comGF | 2387318..2387713 (+) | 396 | WP_003153090.1 | competence type IV pilus minor pilin ComGF | - |
| DXY21_RS12235 (DXY21_02440) | comGG | 2387714..2388091 (+) | 378 | WP_003153092.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| DXY21_RS12240 (DXY21_02441) | - | 2388148..2388327 (+) | 180 | WP_003153093.1 | YqzE family protein | - |
| DXY21_RS12245 (DXY21_02442) | - | 2388367..2388696 (-) | 330 | WP_003153097.1 | DUF3889 domain-containing protein | - |
| DXY21_RS12250 (DXY21_02443) | tapA | 2388955..2389626 (+) | 672 | WP_003153099.1 | amyloid fiber anchoring/assembly protein TapA | - |
| DXY21_RS12255 (DXY21_02444) | sipW | 2389598..2390182 (+) | 585 | WP_003153100.1 | signal peptidase I SipW | - |
| DXY21_RS12260 (DXY21_02445) | tasA | 2390246..2391031 (+) | 786 | WP_003153102.1 | biofilm matrix protein TasA | - |
| DXY21_RS12265 (DXY21_02446) | sinR | 2391079..2391414 (-) | 336 | WP_003153104.1 | transcriptional regulator SinR | Regulator |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 9721.32 Da Isoelectric Point: 6.2027
>NTDB_id=310411 DXY21_RS12215 WP_042635730.1 2386313..2386579(+) (comGC) [Bacillus velezensis strain SRCM101368]
MLIVLFIVSILLLITIPNVTKHNQSIQHKGCEGLQNMVKAQVTAYEIDHEGKMPDMNDLQSEGYIKKNTACPNGKQILIS
GGEVTVEQ
MLIVLFIVSILLLITIPNVTKHNQSIQHKGCEGLQNMVKAQVTAYEIDHEGKMPDMNDLQSEGYIKKNTACPNGKQILIS
GGEVTVEQ
Nucleotide
Download Length: 267 bp
>NTDB_id=310411 DXY21_RS12215 WP_042635730.1 2386313..2386579(+) (comGC) [Bacillus velezensis strain SRCM101368]
ATGCTGATCGTTTTATTTATCGTTTCCATTCTGCTTTTAATCACCATTCCTAACGTTACAAAACATAATCAAAGCATTCA
GCATAAAGGCTGTGAAGGACTGCAGAATATGGTGAAAGCCCAAGTGACGGCGTACGAAATCGACCATGAAGGTAAAATGC
CGGATATGAACGATTTACAATCAGAGGGGTATATCAAAAAGAATACAGCCTGCCCGAATGGTAAACAGATCTTAATTAGT
GGCGGAGAAGTTACAGTTGAACAATAA
ATGCTGATCGTTTTATTTATCGTTTCCATTCTGCTTTTAATCACCATTCCTAACGTTACAAAACATAATCAAAGCATTCA
GCATAAAGGCTGTGAAGGACTGCAGAATATGGTGAAAGCCCAAGTGACGGCGTACGAAATCGACCATGAAGGTAAAATGC
CGGATATGAACGATTTACAATCAGAGGGGTATATCAAAAAGAATACAGCCTGCCCGAATGGTAAACAGATCTTAATTAGT
GGCGGAGAAGTTACAGTTGAACAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
74.648 |
80.682 |
0.602 |