Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | DXY21_RS12210 | Genome accession | NZ_CP031694 |
| Coordinates | 2385229..2386266 (+) | Length | 345 a.a. |
| NCBI ID | WP_003153086.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain SRCM101368 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2380229..2391266
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXY21_RS12190 (DXY21_02431) | - | 2380715..2381545 (+) | 831 | WP_003153080.1 | STAS domain-containing protein | - |
| DXY21_RS12195 (DXY21_02432) | - | 2381583..2382884 (-) | 1302 | WP_014305416.1 | hemolysin family protein | - |
| DXY21_RS12200 (DXY21_02433) | - | 2383030..2383980 (+) | 951 | WP_003153082.1 | magnesium transporter CorA family protein | - |
| DXY21_RS12205 (DXY21_02434) | comGA | 2384172..2385242 (+) | 1071 | WP_003153083.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DXY21_RS12210 (DXY21_02435) | comGB | 2385229..2386266 (+) | 1038 | WP_003153086.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DXY21_RS12215 (DXY21_02436) | comGC | 2386313..2386579 (+) | 267 | WP_042635730.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DXY21_RS12220 (DXY21_02437) | comGD | 2386569..2387006 (+) | 438 | WP_003153088.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| DXY21_RS12225 (DXY21_02438) | comGE | 2386990..2387304 (+) | 315 | WP_003153089.1 | competence type IV pilus minor pilin ComGE | - |
| DXY21_RS12230 (DXY21_02439) | comGF | 2387318..2387713 (+) | 396 | WP_003153090.1 | competence type IV pilus minor pilin ComGF | - |
| DXY21_RS12235 (DXY21_02440) | comGG | 2387714..2388091 (+) | 378 | WP_003153092.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| DXY21_RS12240 (DXY21_02441) | - | 2388148..2388327 (+) | 180 | WP_003153093.1 | YqzE family protein | - |
| DXY21_RS12245 (DXY21_02442) | - | 2388367..2388696 (-) | 330 | WP_003153097.1 | DUF3889 domain-containing protein | - |
| DXY21_RS12250 (DXY21_02443) | tapA | 2388955..2389626 (+) | 672 | WP_003153099.1 | amyloid fiber anchoring/assembly protein TapA | - |
| DXY21_RS12255 (DXY21_02444) | sipW | 2389598..2390182 (+) | 585 | WP_003153100.1 | signal peptidase I SipW | - |
| DXY21_RS12260 (DXY21_02445) | tasA | 2390246..2391031 (+) | 786 | WP_003153102.1 | biofilm matrix protein TasA | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39544.84 Da Isoelectric Point: 9.4989
>NTDB_id=310410 DXY21_RS12210 WP_003153086.1 2385229..2386266(+) (comGB) [Bacillus velezensis strain SRCM101368]
MKRIKRTWPLKDQAAFLKRLGEMTEKGYSLIEGLRLLKLQLHKRQLAELTDGIRRLREGDAFYEVLEALSFHKEAVSICY
FAEKHGELPGAMKQSGDLLQRKLMQTNQIKKMLRYPMFLISSVCVMFYILQSLIIPQFSGIYQSMNMNTSGATAFIFAFF
RHFHEACALALSAAFCLFLYVWFLCKKKSPQDKMLIVVKIPLLGKAAVLFNSYFFSLQLSSLLKSGLSIYDSLTAFKEQS
FLPFYREEAEMLITRLKAGETIESALSGHPCYEKDLAAAVSHGQANGLLHRELYTYSQFMMERLEQNAAKYTGILQPVIY
GVVAGMILIVYMSMLMPMYQMMNQM
MKRIKRTWPLKDQAAFLKRLGEMTEKGYSLIEGLRLLKLQLHKRQLAELTDGIRRLREGDAFYEVLEALSFHKEAVSICY
FAEKHGELPGAMKQSGDLLQRKLMQTNQIKKMLRYPMFLISSVCVMFYILQSLIIPQFSGIYQSMNMNTSGATAFIFAFF
RHFHEACALALSAAFCLFLYVWFLCKKKSPQDKMLIVVKIPLLGKAAVLFNSYFFSLQLSSLLKSGLSIYDSLTAFKEQS
FLPFYREEAEMLITRLKAGETIESALSGHPCYEKDLAAAVSHGQANGLLHRELYTYSQFMMERLEQNAAKYTGILQPVIY
GVVAGMILIVYMSMLMPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=310410 DXY21_RS12210 WP_003153086.1 2385229..2386266(+) (comGB) [Bacillus velezensis strain SRCM101368]
ATGAAGCGGATTAAACGAACCTGGCCGTTGAAGGATCAAGCGGCTTTTTTGAAAAGGCTCGGTGAAATGACGGAAAAAGG
ATACAGTCTGATTGAAGGGCTCAGACTGCTGAAACTCCAGCTGCATAAACGTCAGCTTGCAGAGCTGACGGACGGAATCC
GCAGGCTGAGGGAAGGTGATGCGTTTTACGAAGTGCTTGAGGCACTGTCTTTTCATAAAGAAGCCGTCTCTATCTGCTAT
TTCGCGGAGAAACACGGAGAATTGCCGGGGGCGATGAAACAAAGCGGCGATTTGTTACAGAGAAAGCTCATGCAGACGAA
TCAAATCAAAAAAATGCTCCGGTATCCGATGTTTTTAATTTCTTCCGTCTGTGTCATGTTTTATATCCTGCAAAGTTTAA
TTATTCCGCAGTTTTCTGGGATTTATCAATCAATGAATATGAATACATCCGGTGCGACTGCTTTCATCTTTGCATTTTTT
CGGCATTTTCATGAAGCCTGCGCACTGGCGCTGTCCGCCGCTTTCTGCTTGTTTTTGTACGTTTGGTTCTTATGTAAGAA
AAAATCCCCGCAAGATAAAATGCTCATTGTTGTGAAAATACCCCTCTTGGGAAAAGCGGCCGTTCTTTTTAACAGCTACT
TTTTCTCTTTACAGCTCAGCAGTCTTCTGAAATCCGGCCTTTCTATCTATGACAGCTTAACAGCTTTTAAAGAACAATCT
TTTCTGCCTTTTTATCGTGAAGAAGCAGAGATGCTCATTACACGTCTGAAAGCCGGAGAAACCATAGAATCCGCTCTTTC
CGGGCATCCGTGTTATGAAAAAGATCTTGCGGCTGCAGTCAGCCACGGACAGGCAAACGGCCTGCTTCACCGCGAACTTT
ATACGTACAGCCAGTTTATGATGGAGCGTCTTGAACAAAACGCGGCGAAGTATACCGGCATTCTCCAGCCTGTCATTTAC
GGTGTTGTGGCCGGTATGATTTTAATTGTCTACATGTCAATGCTGATGCCGATGTACCAGATGATGAACCAAATGTAA
ATGAAGCGGATTAAACGAACCTGGCCGTTGAAGGATCAAGCGGCTTTTTTGAAAAGGCTCGGTGAAATGACGGAAAAAGG
ATACAGTCTGATTGAAGGGCTCAGACTGCTGAAACTCCAGCTGCATAAACGTCAGCTTGCAGAGCTGACGGACGGAATCC
GCAGGCTGAGGGAAGGTGATGCGTTTTACGAAGTGCTTGAGGCACTGTCTTTTCATAAAGAAGCCGTCTCTATCTGCTAT
TTCGCGGAGAAACACGGAGAATTGCCGGGGGCGATGAAACAAAGCGGCGATTTGTTACAGAGAAAGCTCATGCAGACGAA
TCAAATCAAAAAAATGCTCCGGTATCCGATGTTTTTAATTTCTTCCGTCTGTGTCATGTTTTATATCCTGCAAAGTTTAA
TTATTCCGCAGTTTTCTGGGATTTATCAATCAATGAATATGAATACATCCGGTGCGACTGCTTTCATCTTTGCATTTTTT
CGGCATTTTCATGAAGCCTGCGCACTGGCGCTGTCCGCCGCTTTCTGCTTGTTTTTGTACGTTTGGTTCTTATGTAAGAA
AAAATCCCCGCAAGATAAAATGCTCATTGTTGTGAAAATACCCCTCTTGGGAAAAGCGGCCGTTCTTTTTAACAGCTACT
TTTTCTCTTTACAGCTCAGCAGTCTTCTGAAATCCGGCCTTTCTATCTATGACAGCTTAACAGCTTTTAAAGAACAATCT
TTTCTGCCTTTTTATCGTGAAGAAGCAGAGATGCTCATTACACGTCTGAAAGCCGGAGAAACCATAGAATCCGCTCTTTC
CGGGCATCCGTGTTATGAAAAAGATCTTGCGGCTGCAGTCAGCCACGGACAGGCAAACGGCCTGCTTCACCGCGAACTTT
ATACGTACAGCCAGTTTATGATGGAGCGTCTTGAACAAAACGCGGCGAAGTATACCGGCATTCTCCAGCCTGTCATTTAC
GGTGTTGTGGCCGGTATGATTTTAATTGTCTACATGTCAATGCTGATGCCGATGTACCAGATGATGAACCAAATGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
65.325 |
93.623 |
0.612 |