Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   DXY21_RS02875 Genome accession   NZ_CP031694
Coordinates   559252..559371 (-) Length   39 a.a.
NCBI ID   WP_003156334.1    Uniprot ID   I2C1C3
Organism   Bacillus velezensis strain SRCM101368     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 554252..564371
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXY21_RS02850 (DXY21_00567) - 554491..555249 (-) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  DXY21_RS02855 (DXY21_00568) - 555243..556190 (-) 948 WP_003156331.1 iron chelate uptake ABC transporter family permease subunit -
  DXY21_RS02860 (DXY21_00569) ceuB 556180..557133 (-) 954 WP_046559346.1 ABC transporter permease Machinery gene
  DXY21_RS02865 (DXY21_00570) - 557548..558912 (+) 1365 WP_014304341.1 aspartate kinase -
  DXY21_RS02870 - 558992..559102 (+) 111 WP_369719092.1 YjcZ family sporulation protein -
  DXY21_RS02875 (DXY21_00571) phrC 559252..559371 (-) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  DXY21_RS02880 (DXY21_00572) rapC 559355..560503 (-) 1149 WP_014304340.1 Rap family tetratricopeptide repeat protein Regulator
  DXY21_RS02885 (DXY21_00573) - 560656..562089 (-) 1434 WP_162130794.1 sensor histidine kinase -
  DXY21_RS02890 (DXY21_00574) - 562076..562759 (-) 684 WP_024084885.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4228.96 Da        Isoelectric Point: 8.0285

>NTDB_id=310370 DXY21_RS02875 WP_003156334.1 559252..559371(-) (phrC) [Bacillus velezensis strain SRCM101368]
MKLKSKWFVICLAAAAIFTVTGAGQTDQAEFHVAERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=310370 DXY21_RS02875 WP_003156334.1 559252..559371(-) (phrC) [Bacillus velezensis strain SRCM101368]
ATGAAATTGAAATCTAAATGGTTTGTTATTTGTTTAGCAGCCGCCGCGATTTTTACAGTGACAGGTGCAGGCCAGACAGA
TCAGGCTGAATTCCATGTAGCTGAAAGAGGAATGACGTGA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C1C3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

70

100

0.718

Multiple sequence alignment