Detailed information NTG0309482

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: E3U39_RS15230
• Genome accession: NZ_CP038028
• Coordinates: 3041048..3042052 (+)
• Length: 334 a.a.
• NCBI ID: WP_032871678.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain FS1092
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 3036048..3047052

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E3U39_RS15205 (E3U39_15205)	murC	3036782..3038080 (+)	1299	WP_015418019.1	UDP-N-acetylmuramate--L-alanine ligase	-
E3U39_RS15210 (E3U39_15210)	-	3038236..3038658 (+)	423	WP_007408777.1	DUF948 domain-containing protein	-
E3U39_RS15215 (E3U39_15215)	-	3038691..3039104 (+)	414	WP_003152380.1	YtxH domain-containing protein	-
E3U39_RS15220 (E3U39_15220)	ytxJ	3039130..3039456 (+)	327	WP_033574218.1	bacillithiol system redox-active protein YtxJ	-
E3U39_RS15225 (E3U39_15225)	-	3039693..3040769 (+)	1077	WP_003152383.1	bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase	-
E3U39_RS15230 (E3U39_15230)	ccpA	3041048..3042052 (+)	1005	WP_032871678.1	catabolite control protein A	Regulator
E3U39_RS15235 (E3U39_15235)	motP	3042121..3042936 (+)	816	WP_007408775.1	flagellar motor protein MotP	-
E3U39_RS15240 (E3U39_15240)	motS	3042926..3043615 (+)	690	WP_053573115.1	flagellar motor protein MotS	-
E3U39_RS15245 (E3U39_15245)	-	3043625..3044791 (-)	1167	WP_043021714.1	acetoin utilization protein AcuC	-
E3U39_RS15250 (E3U39_15250)	-	3044788..3045432 (-)	645	WP_033574215.1	acetoin utilization AcuB family protein	-
E3U39_RS15255 (E3U39_15255)	-	3045457..3046089 (-)	633	WP_015240397.1	GNAT family N-acetyltransferase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36929.27 Da
• Isoelectric Point: 4.9206

>NTDB_id=309482 E3U39_RS15230 WP_032871678.1 3041048..3042052(+) (ccpA) [Bacillus amyloliquefaciens strain FS1092]
MSNITIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIDRLGYRPNAVARGLASKKTTTVGVIIPDISSIFYSELA
RGIEDIATMYKYNIILSNSDQNLEKELHLLNTMLGKQVDGIVFMGGNITDEHVEEFKRSPVPIVLAASVEEQGETPSVAI
DYEQAIYDAVKLFIDKGHRDIALVSGPMQEPINRSKKLQGYKRALEEAAIPFNEQFVAEGDYTYDSGMEALQSLMGLDRK
PTAILSATDEMALGIIHAAQDQGLSIPDDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIV
ELPHRIELRQSTKS

Nucleotide

• Length: 1005 bp

>NTDB_id=309482 E3U39_RS15230 WP_032871678.1 3041048..3042052(+) (ccpA) [Bacillus amyloliquefaciens strain FS1092]
GTGAGCAACATTACGATATACGATGTGGCCAGAGAAGCAAATGTCAGTATGGCGACTGTTTCCCGCGTCGTGAACGGCAA
CCCGAATGTAAAACCGACGACCAGAAAAAAAGTATTGGAAGCCATTGACCGGCTCGGCTATCGCCCGAATGCGGTGGCAA
GAGGGCTTGCAAGCAAAAAAACGACTACGGTCGGCGTCATCATCCCTGATATCTCAAGCATTTTCTACTCTGAACTTGCG
CGTGGAATTGAAGATATCGCGACGATGTACAAATATAATATTATTTTAAGCAACTCGGACCAAAATCTTGAGAAAGAACT
GCATCTGTTAAATACGATGCTTGGCAAACAAGTGGACGGTATCGTATTTATGGGCGGCAACATTACGGACGAGCATGTCG
AAGAATTTAAGCGCTCTCCTGTGCCGATCGTCTTGGCGGCATCAGTGGAAGAACAGGGCGAGACGCCTTCTGTCGCCATT
GATTACGAACAGGCGATTTATGATGCCGTTAAGCTTTTCATTGATAAAGGGCATCGCGATATTGCACTCGTCTCCGGACC
GATGCAAGAGCCGATCAACCGTTCGAAAAAACTGCAAGGGTACAAACGGGCGCTTGAAGAAGCGGCGATTCCGTTTAACG
AGCAATTCGTAGCGGAAGGCGATTACACTTATGATTCCGGTATGGAGGCGCTTCAAAGCTTGATGGGCCTTGACCGGAAA
CCGACGGCGATTCTTTCTGCGACGGATGAAATGGCCCTCGGCATTATCCATGCGGCCCAAGATCAAGGTCTTTCGATACC
TGATGATCTTGATATTATCGGTTTTGACAATACGAGATTGAGCCTGATGGTCCGCCCTCAGCTTTCAACAGTCGTGCAGC
CTACGTACGATATCGGCGCCGTGGCGATGAGACTTTTGACAAAACTGATGAACAAAGAGCCGGTTGAAGAGCATATCGTC
GAATTGCCTCACCGCATCGAATTAAGACAATCAACCAAGTCATAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (171-332)

• Bacterial regulatory proteins, lacI family (LacI) (5-50)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	53.939	98.802	0.533
ccpA	Streptococcus gordonii str. Challis substr. CH1	53.03	98.802	0.524
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	50.602	99.401	0.503