Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SSUSC84_RS07510 Genome accession   NC_012924
Coordinates   1517875..1518558 (-) Length   227 a.a.
NCBI ID   WP_012027525.1    Uniprot ID   A0A0H3MWH7
Organism   Streptococcus suis SC84     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1512875..1523558
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSUSC84_RS10880 (SSUSC84_1434) - 1512916..1513080 (-) 165 WP_012027521.1 hypothetical protein -
  SSUSC84_RS07490 (SSUSC84_1435) tnpA 1513386..1513850 (-) 465 WP_012775157.1 IS200/IS605-like element ISSsu4 family transposase -
  SSUSC84_RS07495 (SSUSC84_1436) - 1514025..1516034 (-) 2010 WP_012775277.1 ABC transporter permease -
  SSUSC84_RS07500 (SSUSC84_1437) - 1516036..1516794 (-) 759 WP_012027523.1 ABC transporter ATP-binding protein -
  SSUSC84_RS07505 (SSUSC84_1438) - 1516890..1517882 (-) 993 WP_012027524.1 sensor histidine kinase -
  SSUSC84_RS07510 (SSUSC84_1439) braR 1517875..1518558 (-) 684 WP_012027525.1 response regulator transcription factor Regulator
  SSUSC84_RS07515 (SSUSC84_1440) - 1518728..1519909 (+) 1182 WP_012027526.1 DUF2974 domain-containing protein -
  SSUSC84_RS07520 (SSUSC84_1441) - 1519924..1521048 (-) 1125 WP_012027527.1 aminotransferase -
  SSUSC84_RS07525 (SSUSC84_1442) - 1521195..1521956 (-) 762 WP_012027528.1 nuclear transport factor 2 family protein -
  SSUSC84_RS07530 (SSUSC84_1443) - 1521966..1523477 (-) 1512 WP_012027529.1 ABC transporter permease/substrate-binding protein -

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 26581.80 Da        Isoelectric Point: 4.5525

>NTDB_id=30932 SSUSC84_RS07510 WP_012027525.1 1517875..1518558(-) (braR) [Streptococcus suis SC84]
MQKILLIEDDKTISQLVAKNLINWGYQVQEVKDFQMVLEQMEEFQPHLILLDIGLPFFNGYYWCQEIRKTSRVPIMFLSS
HDQPMDIVMAINMGADDYVTKPFEMTVLLAKIQGLLRRTYDFVGEQSLLWFEEISLDLKTMQVSYGQVVEELTRNEFQIL
RVLFEHGKEVVSREELMRELWNSDIFVDDNTLSVNIARLRKKLAELDLPDVIATKKGVGYGLVWTHE

Nucleotide


Download         Length: 684 bp        

>NTDB_id=30932 SSUSC84_RS07510 WP_012027525.1 1517875..1518558(-) (braR) [Streptococcus suis SC84]
ATGCAGAAAATTCTTCTTATCGAGGATGATAAAACGATTAGCCAACTAGTTGCTAAAAACTTGATAAACTGGGGTTACCA
GGTGCAAGAGGTCAAGGATTTTCAGATGGTTTTGGAACAGATGGAAGAGTTTCAGCCCCATTTGATTTTACTGGATATTG
GTCTGCCGTTTTTCAATGGCTATTACTGGTGTCAGGAAATTCGCAAGACATCCCGTGTGCCCATTATGTTTCTGTCTTCC
CATGACCAGCCAATGGATATTGTTATGGCGATCAATATGGGGGCGGATGACTATGTGACCAAGCCCTTTGAAATGACGGT
TCTCCTGGCCAAAATACAGGGGCTTCTTAGAAGAACCTATGACTTTGTCGGAGAACAAAGTTTACTCTGGTTTGAGGAGA
TTTCCCTAGACCTAAAGACCATGCAGGTGTCCTATGGACAGGTTGTGGAAGAGCTGACGCGAAATGAATTTCAGATTTTA
CGCGTTTTATTTGAACATGGCAAGGAAGTGGTCAGCCGTGAGGAGCTGATGAGAGAACTCTGGAACAGTGATATTTTTGT
GGATGACAATACCCTGTCGGTTAACATCGCTCGCCTGCGTAAGAAATTGGCAGAACTGGATCTGCCAGATGTGATTGCGA
CCAAGAAAGGAGTAGGCTACGGCCTGGTGTGGACACATGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3MWH7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.706

96.035

0.458
  vicR Streptococcus mutans UA159

39.13

100

0.396
  micA Streptococcus pneumoniae Cp1015

37.991

100

0.383

Multiple sequence alignment