Detailed information NTG0030915

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPSH_RS01640
• Genome accession: NC_010698
• Coordinates: 330517..331317 (+)
• Length: 266 a.a.
• NCBI ID: WP_000841131.1
• Uniprot ID: -
• Organism: Helicobacter pylori Shi470
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 325517..336317

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPSH_RS01605 (HPSH_01700)	pseH	326019..326561 (+)	543	WP_000742644.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPSH_RS01610 (HPSH_01705)	-	326494..327432 (-)	939	WP_000833957.1	tetraacyldisaccharide 4'-kinase	-
HPSH_RS01615 (HPSH_01710)	-	327429..328211 (-)	783	WP_001168228.1	NAD+ synthase	-
HPSH_RS01625 (HPSH_01715)	ilvC	328458..329450 (+)	993	WP_001207745.1	ketol-acid reductoisomerase	-
HPSH_RS01630 (HPSH_01720)	minD	329469..330275 (+)	807	WP_001019024.1	septum site-determining protein MinD	-
HPSH_RS01635 (HPSH_01725)	minE	330272..330505 (+)	234	WP_000051411.1	cell division topological specificity factor MinE	-
HPSH_RS01640 (HPSH_01730)	dprA	330517..331317 (+)	801	WP_000841131.1	DNA-processing protein DprA	Machinery gene
HPSH_RS01645 (HPSH_01735)	dprB	331314..331718 (+)	405	WP_000599240.1	Holliday junction resolvase RuvX	Machinery gene
HPSH_RS01650 (HPSH_01745)	-	331849..332319 (+)	471	WP_012443302.1	tetratricopeptide repeat protein	-
HPSH_RS01655 (HPSH_01750)	-	332509..332847 (+)	339	WP_000699918.1	hypothetical protein	-
HPSH_RS01660 (HPSH_01755)	-	332831..333397 (+)	567	WP_000037139.1	hypothetical protein	-
HPSH_RS07895 (HPSH_01760)	-	333409..333657 (+)	249	WP_012443303.1	glycoside hydrolase family protein	-
HPSH_RS08490 (HPSH_01765)	-	333663..334040 (+)	378	WP_012443304.1	hypothetical protein	-
HPSH_RS01680 (HPSH_01780)	-	334402..334773 (+)	372	WP_411155703.1	DUF1294 domain-containing protein	-
HPSH_RS01685 (HPSH_01785)	-	334789..335574 (+)	786	WP_000458572.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29868.72 Da
• Isoelectric Point: 8.2316

>NTDB_id=30915 HPSH_RS01640 WP_000841131.1 330517..331317(+) (dprA) [Helicobacter pylori Shi470]
MKSNFQYSTLENIPKAFDILKDPPKKLYCVGDIKLLDATLKVAIIGTRRPTPYSKQHTITLAREFAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHQVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=30915 HPSH_RS01640 WP_000841131.1 330517..331317(+) (dprA) [Helicobacter pylori Shi470]
ATGAAAAGCAACTTCCAATACAGCACGCTAGAGAATATCCCTAAAGCCTTTGATATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGACGCGACTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGTTTGCTAAAAATGGTGCGGTTATTGTGAGTGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCACCAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTAGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCCCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTCAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATGAAAGACGAATTTTTAGAATATTGCGCCAAAAACCCGAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.241	100	0.962
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	47.788	84.962	0.406