Detailed information NTG0307415

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: DV947_RS04375
• Genome accession: NZ_CP031545
• Coordinates: 816343..817182 (+)
• Length: 279 a.a.
• NCBI ID: WP_116920213.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain ST109
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 811343..822182

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DV947_RS04345 (DV947_04345)	-	811758..812285 (+)	528	WP_041827017.1	ECF transporter S component	-
DV947_RS04350 (DV947_04350)	-	812309..812824 (+)	516	WP_011225884.1	transcription repressor NadR	-
DV947_RS04355 (DV947_04355)	-	812919..813608 (+)	690	WP_046206437.1	helix-turn-helix transcriptional regulator	-
DV947_RS04360 (DV947_04360)	ylqF	813736..814590 (+)	855	WP_011681084.1	ribosome biogenesis GTPase YlqF	-
DV947_RS04365 (DV947_04365)	-	814577..815344 (+)	768	WP_116920212.1	ribonuclease HII	-
DV947_RS04370 (DV947_04370)	-	815355..816275 (+)	921	WP_014608255.1	ROK family protein	-
DV947_RS04375 (DV947_04375)	dprA	816343..817182 (+)	840	WP_116920213.1	DNA-processing protein DprA	Machinery gene
DV947_RS04380 (DV947_04380)	topA	817350..819494 (+)	2145	WP_064355758.1	type I DNA topoisomerase	-
DV947_RS04385 (DV947_04385)	-	819611..820435 (+)	825	WP_095559343.1	TraX family protein	-
DV947_RS04390 (DV947_04390)	-	820472..821131 (+)	660	WP_011227158.1	response regulator transcription factor	-

Sequence

Protein

• Length: 279 a.a.
• Molecular weight: 31260.22 Da
• Isoelectric Point: 8.4536

>NTDB_id=307415 DV947_RS04375 WP_116920213.1 816343..817182(+) (dprA) [Streptococcus thermophilus strain ST109]
MNNFELFKLKAAGLTNLNILNILDYQKNQDKKLSLRDMAVVSKSKNAVLFMEKYKNLDVKQLKEDFQRFPTLSIFDKEYP
IELKHSYNPPVLLFYQGNIDLLSKPKLAVVGARKCSETGKQSVRKIVHELGNAFTIVSGLASGIDTCAHMEALKNRGNTI
AVIGTGLDVYYPKENKALQDYMIKNHLVLTEYGPGEQPLKYHFPERNRIISGLCQGVMVVEAKLRSGSLITCERAMEEGR
DVFVIPGNILDGKSDGCHHLIQEGAKCITTGFDIISEFS

Nucleotide

• Length: 840 bp

>NTDB_id=307415 DV947_RS04375 WP_116920213.1 816343..817182(+) (dprA) [Streptococcus thermophilus strain ST109]
ATGAATAACTTTGAACTTTTTAAACTAAAAGCTGCTGGATTGACGAATTTAAACATCCTTAACATTTTAGACTATCAAAA
AAATCAAGATAAAAAATTGAGCTTACGTGATATGGCAGTGGTATCTAAGTCTAAAAATGCCGTTCTCTTTATGGAAAAAT
ACAAGAATTTAGATGTTAAGCAGCTTAAGGAAGATTTTCAACGTTTTCCGACCTTATCAATTTTTGATAAGGAGTATCCC
ATTGAGCTGAAACATTCCTATAATCCTCCTGTCCTCCTCTTTTATCAAGGGAATATTGATTTGCTAAGTAAACCCAAGTT
AGCAGTAGTTGGTGCCAGAAAGTGTTCTGAAACAGGCAAACAGTCTGTTCGAAAAATTGTTCATGAACTTGGGAATGCCT
TTACTATTGTAAGTGGCTTAGCGAGTGGAATTGATACTTGTGCTCATATGGAGGCCTTAAAAAATAGAGGTAACACCATT
GCAGTTATCGGGACTGGACTAGACGTATATTATCCTAAAGAAAACAAAGCTTTACAGGACTATATGATTAAAAATCATTT
AGTTCTTACAGAATACGGACCGGGTGAACAGCCACTTAAATACCATTTTCCTGAACGAAATCGGATAATTTCTGGATTGT
GTCAAGGGGTTATGGTGGTTGAAGCCAAGCTTCGCTCGGGAAGTCTTATTACTTGTGAGCGTGCAATGGAAGAAGGAAGA
GATGTTTTCGTCATACCAGGAAATATTTTAGATGGAAAATCGGATGGATGCCATCACCTCATTCAAGAGGGCGCAAAGTG
CATTACTACAGGATTTGACATCATTTCAGAATTTTCATAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (71-269)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-62)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	72.043	100	0.72
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus pneumoniae D39	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus pneumoniae R6	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	62.95	99.642	0.627
dprA/cilB/dalA	Streptococcus mitis SK321	62.95	99.642	0.627
dprA	Lactococcus lactis subsp. cremoris KW2	59.712	99.642	0.595
dprA	Latilactobacillus sakei subsp. sakei 23K	39.382	92.832	0.366