Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | DYB08_RS13180 | Genome accession | NZ_CP031444 |
| Coordinates | 2731936..2732346 (+) | Length | 136 a.a. |
| NCBI ID | WP_002017231.1 | Uniprot ID | N9KEH5 |
| Organism | Acinetobacter baumannii strain MDR-UNC | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2726936..2737346
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DYB08_RS13165 (DYB08_13170) | - | 2727925..2730231 (+) | 2307 | WP_000259109.1 | RelA/SpoT family protein | - |
| DYB08_RS13170 (DYB08_13175) | - | 2730276..2731049 (-) | 774 | WP_000682841.1 | SDR family oxidoreductase | - |
| DYB08_RS13175 (DYB08_13180) | mazG | 2731161..2731967 (+) | 807 | WP_000359483.1 | nucleoside triphosphate pyrophosphohydrolase | - |
| DYB08_RS13180 (DYB08_13185) | comEA | 2731936..2732346 (+) | 411 | WP_002017231.1 | ComEA family DNA-binding protein | Machinery gene |
| DYB08_RS13185 (DYB08_13190) | pcnB | 2732471..2733934 (+) | 1464 | WP_129193531.1 | polynucleotide adenylyltransferase PcnB | - |
| DYB08_RS13190 (DYB08_13195) | folK | 2733931..2734413 (+) | 483 | WP_000219213.1 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | - |
| DYB08_RS13195 (DYB08_13200) | panB | 2734459..2735268 (+) | 810 | WP_000624763.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | - |
| DYB08_RS13200 (DYB08_13205) | panC | 2735272..2736120 (+) | 849 | WP_000846362.1 | pantoate--beta-alanine ligase | - |
| DYB08_RS13205 (DYB08_13210) | rapZ | 2736143..2736994 (+) | 852 | WP_000821671.1 | RNase adapter RapZ | - |
| DYB08_RS13210 (DYB08_13215) | - | 2736991..2737260 (+) | 270 | WP_000567533.1 | HPr family phosphocarrier protein | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 15654.89 Da Isoelectric Point: 10.3828
>NTDB_id=306765 DYB08_RS13180 WP_002017231.1 2731936..2732346(+) (comEA) [Acinetobacter baumannii strain MDR-UNC]
MQYSMRFWKNKYFVLIILCLGVISPSVYAQSFDQNFQEWKAKQQMYDQKLNITKSSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGVGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL
MQYSMRFWKNKYFVLIILCLGVISPSVYAQSFDQNFQEWKAKQQMYDQKLNITKSSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGVGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL
Nucleotide
Download Length: 411 bp
>NTDB_id=306765 DYB08_RS13180 WP_002017231.1 2731936..2732346(+) (comEA) [Acinetobacter baumannii strain MDR-UNC]
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTGTTTTAATAATTTTGTGCTTGGGAGTAATTTCACCTTCGGT
TTACGCTCAATCTTTTGATCAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCACTA
AGTCTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAATTAAAAGGTGTAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGACAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCTATTTTTGAAAAAAATAAATCGCGTT
TAGCCTTATAA
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTGTTTTAATAATTTTGTGCTTGGGAGTAATTTCACCTTCGGT
TTACGCTCAATCTTTTGATCAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCACTA
AGTCTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAATTAAAAGGTGTAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGACAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCTATTTTTGAAAAAAATAAATCGCGTT
TAGCCTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Acinetobacter baumannii strain A118 |
97.794 |
100 |
0.978 |
| comEA | Acinetobacter baumannii D1279779 |
95.588 |
100 |
0.956 |
| comEA | Acinetobacter baylyi ADP1 |
42.748 |
96.324 |
0.412 |